Gene detail information of Glyur000108s00010446.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57960.10GTP-binding protein, HflX
NRKHN12677.10GTPase HflX [Glycine soja]
COGYP_005441900.17.00E-115GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|Q0WTB4|Y3725_ARATH7.00E-32GTP-binding protein At3g49725, chloroplastic (Precursor)
trEMBLtr|I1MXZ3|I1MXZ3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G37250.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00108320290330273+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000108s00010446.2PF00141.18peroxidase511921.40E-43
Glyur000108s00010446.2PF00141.18peroxidase1942705.40E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.845
SRR1783600control14.786
SRR1783602moderate drought stress15.318
SRR1811619moderate drought stress14.778

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.414
DRR006520Root Summer glycyrrhizin high producing strain12.074
DRR006521Root Winter glycyrrhizin high producing strain13.103
DRR006522Root Winter glycyrrhizin high producing strain13.298
DRR006523Root Summer glycyrrhizin low producing strain16.338
DRR006524Root Summer glycyrrhizin low producing strain15.955
DRR006525Leaf Summer glycyrrhizin high producing strain27.403
DRR006526Leaf Summer glycyrrhizin high producing strain27.543

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.262
SRR2868004Drought Stress(Tissue:root)17.194
SRR2967015Control (Tissue:root)16.633

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.498
SRR9715740Leave48.872
SRR9715741Leave33.873
SRR9715739Root2.588
SRR9715742Root9.084
SRR9715743Root7.436

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.344
SRR8749028MeJA induced 9h13.380
SRR8749029MeJA induced 9h14.985
SRR8749030Uninduced12.226
SRR8749031Uninduced8.987
SRR8749032Uninduced9.012

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.616
SRR8400027Control-Root22.031

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved