Gene detail information of Glyur000109s00010613.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15140.11.00E-93Galactose mutarotase-like superfamily protein
NRXP_003621162.10Aldose 1-epimerase [Medicago truncatula]
COGYP_004271367.12.00E-68aldose 1-epimerase [Planctomyces brasiliensis DSM 5305]
trEMBLtr|G7KZW8|G7KZW8_MEDTR0Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001091642121377-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01785galM, GALM EC:5.1.3.3 Glycolysis / Gluconeogenesis map00010
Galactose metabolismmap00052


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000109s00010613.1PF01263.15Aldose_epim823162.40E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.523
SRR1783600control11.631
SRR1783602moderate drought stress27.074
SRR1811619moderate drought stress26.789

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.550
DRR006520Root Summer glycyrrhizin high producing strain10.294
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain3.594
DRR006524Root Summer glycyrrhizin low producing strain3.487
DRR006525Leaf Summer glycyrrhizin high producing strain17.094
DRR006526Leaf Summer glycyrrhizin high producing strain16.927

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)67.920
SRR2868004Drought Stress(Tissue:root)49.189
SRR2967015Control (Tissue:root)56.154

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.890
SRR9715740Leave70.159
SRR9715741Leave66.983
SRR9715739Root5.380
SRR9715742Root4.263
SRR9715743Root4.933

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.935
SRR8749028MeJA induced 9h67.762
SRR8749029MeJA induced 9h101.670
SRR8749030Uninduced28.550
SRR8749031Uninduced101.538
SRR8749032Uninduced94.956

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.068
SRR8400027Control-Root6.094

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved