Gene detail information of Glyur000109s00010638.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08850.11.00E-93Leucine-rich repeat receptor-like protein kinase family protein
NRKEH21564.10LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_004775215.18.00E-24RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8VZG8|Y4885_ARATH2.00E-113Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|A0A072TVM7|A0A072TVM7_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH21564.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00109166893170576-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000109s00010638.1PF13855.1LRR_81341933.60E-08
Glyur000109s00010638.1PF00560.28LRR_12062280.098
Glyur000109s00010638.1PF00069.20Pkinase3865568.90E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.018
SRR1783600control0.019
SRR1783602moderate drought stress0.038
SRR1811619moderate drought stress0.039

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.113
DRR006520Root Summer glycyrrhizin high producing strain0.109
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.167
DRR006524Root Summer glycyrrhizin low producing strain0.387
DRR006525Leaf Summer glycyrrhizin high producing strain2.346
DRR006526Leaf Summer glycyrrhizin high producing strain2.365

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.019
SRR2868004Drought Stress(Tissue:root)0.112
SRR2967015Control (Tissue:root)0.118

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.165
SRR9715740Leave17.716
SRR9715741Leave22.078
SRR9715739Root0.220
SRR9715742Root0.674
SRR9715743Root0.422

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.702
SRR8749028MeJA induced 9h1.318
SRR8749029MeJA induced 9h0.517
SRR8749030Uninduced0.751
SRR8749031Uninduced0.039
SRR8749032Uninduced0.247

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.158
SRR8400027Control-Root0.585

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved