Gene detail information of Glyur000109s00010647.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G44900.10ARABIDILLO-1
NRKHN20477.10Protein ARABIDILLO 1 [Glycine soja]
Swissprottr|O22161|ADLO1_ARATH0Protein ARABIDILLO 1
trEMBLtr|K7MUN9|K7MUN9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G48841.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00109217004226226+


Gene family

Gene familysubfamily
Ubiquitin FamilyF-box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005488  binding

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000109s00010647.1PF12937.2F-box-like40861.60E-06
Glyur000109s00010647.1PF00514.18Arm4624972.30E-05
Glyur000109s00010647.1PF00514.18Arm5015426.00E-07
Glyur000109s00010647.1PF00514.18Arm5535847.80E-05
Glyur000109s00010647.1PF00514.18Arm5896282.50E-09
Glyur000109s00010647.1PF00514.18Arm6606972.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.131
SRR1783600control21.690
SRR1783602moderate drought stress27.927
SRR1811619moderate drought stress27.612

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.354
DRR006520Root Summer glycyrrhizin high producing strain23.102
DRR006521Root Winter glycyrrhizin high producing strain24.687
DRR006522Root Winter glycyrrhizin high producing strain23.724
DRR006523Root Summer glycyrrhizin low producing strain25.380
DRR006524Root Summer glycyrrhizin low producing strain25.309
DRR006525Leaf Summer glycyrrhizin high producing strain16.173
DRR006526Leaf Summer glycyrrhizin high producing strain16.394

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.555
SRR2868004Drought Stress(Tissue:root)26.651
SRR2967015Control (Tissue:root)32.137

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.914
SRR9715740Leave19.208
SRR9715741Leave15.643
SRR9715739Root30.166
SRR9715742Root27.637
SRR9715743Root26.665

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.862
SRR8749028MeJA induced 9h13.401
SRR8749029MeJA induced 9h11.372
SRR8749030Uninduced8.159
SRR8749031Uninduced6.059
SRR8749032Uninduced8.393

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.362
SRR8400027Control-Root29.830

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved