Gene detail information of Glyur000110s00011751.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04980.1 | 2.00E-08 | PDI-like 2-2 |
| NR | XP_004491086.1 | 2.32E-10 | PREDICTED: protein disulfide isomerase-like 2-3-like [Cicer arietinum] |
| Swissprot | tr|Q9MAU6|PDI22_ARATH | 3.00E-09 | Protein disulfide-isomerase like 2-2 (Precursor) |
| trEMBL | tr|W9SCL0|W9SCL0_9ROSA | 2.00E-10 | Protein disulfide-isomerase like 2-2 {ECO:0000313|EMBL:EXC25526.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00110 | 26334 | 30439 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09584 | PDIA6, TXNDC7 | EC:5.3.4.1 | Protein processing in endoplasmic reticulum | map04141 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.602 |
| SRR1783600 | control | 3.285 |
| SRR1783602 | moderate drought stress | 0.998 |
| SRR1811619 | moderate drought stress | 1.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.145 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.849 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.826 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.236 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.156 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.750 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.157 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.282 |
| SRR2967015 | Control (Tissue:root) | 1.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.124 |
| SRR9715740 | Leave | 1.102 |
| SRR9715741 | Leave | 3.062 |
| SRR9715739 | Root | 0.178 |
| SRR9715742 | Root | 0.974 |
| SRR9715743 | Root | 0.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.105 |
| SRR8749028 | MeJA induced 9h | 10.588 |
| SRR8749029 | MeJA induced 9h | 8.211 |
| SRR8749030 | Uninduced | 3.092 |
| SRR8749031 | Uninduced | 1.582 |
| SRR8749032 | Uninduced | 1.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.262 |
| SRR8400027 | Control-Root | 14.882 |