Gene detail information of Glyur000110s00011755.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G41890.10curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein
NRXP_003535168.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1-like [Glycine max]
COGYP_001958461.11.00E-11hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|P93756|SD31_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 (Precursor)
trEMBLtr|K7K9A9|K7K9A9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G31410.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001106130463607+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000110s00011755.1PF01453.19B_lectin831719.40E-21
Glyur000110s00011755.1PF00954.15S_locus_glycop2493103.20E-11
Glyur000110s00011755.1PF07714.12Pkinase_Tyr5116385.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.944
SRR1783600control4.911
SRR1783602moderate drought stress3.990
SRR1811619moderate drought stress3.928

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.117
DRR006520Root Summer glycyrrhizin high producing strain4.037
DRR006521Root Winter glycyrrhizin high producing strain1.171
DRR006522Root Winter glycyrrhizin high producing strain1.211
DRR006523Root Summer glycyrrhizin low producing strain2.987
DRR006524Root Summer glycyrrhizin low producing strain2.901
DRR006525Leaf Summer glycyrrhizin high producing strain2.021
DRR006526Leaf Summer glycyrrhizin high producing strain2.183

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.597
SRR2868004Drought Stress(Tissue:root)4.992
SRR2967015Control (Tissue:root)7.179

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.619
SRR9715740Leave2.648
SRR9715741Leave1.212
SRR9715739Root2.510
SRR9715742Root3.781
SRR9715743Root4.046

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.279
SRR8749028MeJA induced 9h1.702
SRR8749029MeJA induced 9h2.881
SRR8749030Uninduced0.729
SRR8749031Uninduced0.135
SRR8749032Uninduced0.482

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.834
SRR8400027Control-Root9.680

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved