Gene detail information of Glyur000110s00011770.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30960.11.00E-22SOS3-interacting protein 3
NRNP_001235809.11.04E-25SOS2-like protein kinase [Glycine max]
COGYP_006463618.12.00E-06serine/threonine protein kinase [Solibacillus silvestris StLB046]
Swissprottr|O65554|CIPK6_ARATH9.00E-27CBL-interacting serine/threonine-protein kinase 6
trEMBLtr|Q8LK24|Q8LK24_SOYBN4.00E-26Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G32800.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00110154940155158-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000110s00011770.1PF00069.20Pkinase2611.60E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.937
SRR1783600control3.749
SRR1783602moderate drought stress3.750
SRR1811619moderate drought stress3.764

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.341
DRR006520Root Summer glycyrrhizin high producing strain4.384
DRR006521Root Winter glycyrrhizin high producing strain3.255
DRR006522Root Winter glycyrrhizin high producing strain2.558
DRR006523Root Summer glycyrrhizin low producing strain3.222
DRR006524Root Summer glycyrrhizin low producing strain0.949
DRR006525Leaf Summer glycyrrhizin high producing strain0.401
DRR006526Leaf Summer glycyrrhizin high producing strain0.235

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.535
SRR2868004Drought Stress(Tissue:root)2.545
SRR2967015Control (Tissue:root)2.910

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.909
SRR9715740Leave2.962
SRR9715741Leave1.200
SRR9715739Root5.920
SRR9715742Root2.110
SRR9715743Root5.117

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.039
SRR8749028MeJA induced 9h0.425
SRR8749029MeJA induced 9h0.362
SRR8749030Uninduced1.204
SRR8749031Uninduced0.173
SRR8749032Uninduced0.662

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.232
SRR8400027Control-Root3.535

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved