Gene detail information of Glyur000110s00011777.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G41835.12.00E-92zinc finger (C2H2 type, AN1-like) family protein
NRXP_004513765.12.78E-173PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Cicer arietinum]
Swissprottr|Q0D5B9|SAP16_ORYSJ1.00E-122Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
trEMBLtr|I1JG86|I1JG86_SOYBN2.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G31550.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00110198810201241+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0003676  nucleic acid binding

GO:0008270  zinc ion binding

GO:0046872  metal ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000110s00011777.1PF01428.11zf-AN113521.70E-13
Glyur000110s00011777.1PF13912.1zf-C2H2_625355.7
Glyur000110s00011777.1PF01428.11zf-AN11011421.70E-08
Glyur000110s00011777.1PF13912.1zf-C2H2_62242410.01


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.437
SRR1783600control9.528
SRR1783602moderate drought stress6.725
SRR1811619moderate drought stress6.794

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.525
DRR006520Root Summer glycyrrhizin high producing strain9.012
DRR006521Root Winter glycyrrhizin high producing strain6.098
DRR006522Root Winter glycyrrhizin high producing strain5.649
DRR006523Root Summer glycyrrhizin low producing strain7.280
DRR006524Root Summer glycyrrhizin low producing strain7.242
DRR006525Leaf Summer glycyrrhizin high producing strain9.756
DRR006526Leaf Summer glycyrrhizin high producing strain9.469

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.192
SRR2868004Drought Stress(Tissue:root)19.136
SRR2967015Control (Tissue:root)21.209

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.471
SRR9715740Leave17.976
SRR9715741Leave20.430
SRR9715739Root4.338
SRR9715742Root7.021
SRR9715743Root6.360

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.114
SRR8749028MeJA induced 9h6.614
SRR8749029MeJA induced 9h4.527
SRR8749030Uninduced4.786
SRR8749031Uninduced3.741
SRR8749032Uninduced3.275

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.519
SRR8400027Control-Root15.133

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved