Gene detail information of Glyur000110s00011791.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G41680.10NADPH-dependent thioredoxin reductase C
NRXP_004513864.10PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Cicer arietinum]
COGYP_007080805.10thioredoxin-disulfide reductase [Pleurocapsa sp. PCC 7327]
Swissprottr|O22229|TRXB3_ARATH0NADPH-dependent thioredoxin reductase 3 (Precursor)
trEMBLtr|V7BKM8|V7BKM8_PHAVU0Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00110297884306654+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00384trxB EC:1.8.1.9 Pyrimidine metabolism map00240
Selenocompound metabolismmap00450


Gene Ontology

biological_process

GO:0019430  removal of superoxide radicals

GO:0045454  cell redox homeostasis

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0004791  thioredoxin-disulfide reductase activity

GO:0016491  oxidoreductase activity

GO:0050660  flavin adenine dinucleotide binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000110s00011791.1PF07992.9Pyr_redox_2773605.60E-33
Glyur000110s00011791.1PF00070.22Pyr_redox2242972.30E-13
Glyur000110s00011791.1PF00085.15Thioredoxin4305192.90E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.845
SRR1783600control5.028
SRR1783602moderate drought stress3.073
SRR1811619moderate drought stress3.050

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.731
DRR006520Root Summer glycyrrhizin high producing strain5.854
DRR006521Root Winter glycyrrhizin high producing strain6.341
DRR006522Root Winter glycyrrhizin high producing strain5.993
DRR006523Root Summer glycyrrhizin low producing strain6.809
DRR006524Root Summer glycyrrhizin low producing strain7.027
DRR006525Leaf Summer glycyrrhizin high producing strain61.341
DRR006526Leaf Summer glycyrrhizin high producing strain60.991

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.530
SRR2868004Drought Stress(Tissue:root)6.025
SRR2967015Control (Tissue:root)5.240

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.834
SRR9715740Leave39.929
SRR9715741Leave30.186
SRR9715739Root1.171
SRR9715742Root3.217
SRR9715743Root1.908

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.671
SRR8749028MeJA induced 9h4.983
SRR8749029MeJA induced 9h4.861
SRR8749030Uninduced1.690
SRR8749031Uninduced1.347
SRR8749032Uninduced1.430

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.902
SRR8400027Control-Root10.659

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved