Gene detail information of Glyur000111s00011047.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63280.1 | 3.00E-78 | C2H2-like zinc finger protein |
| NR | KEH33844.1 | 3.97E-172 | zinc finger protein [Medicago truncatula] |
| trEMBL | tr|A0A072UVJ3|A0A072UVJ3_MEDTR | 1.00E-172 | Zinc finger protein {ECO:0000313|EMBL:KEH33844.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00111 | 122666 | 127177 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.639 |
| SRR1783600 | control | 7.806 |
| SRR1783602 | moderate drought stress | 8.681 |
| SRR1811619 | moderate drought stress | 8.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.195 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.078 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.127 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.661 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.988 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.743 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.306 |
| SRR2868004 | Drought Stress(Tissue:root) | 17.202 |
| SRR2967015 | Control (Tissue:root) | 14.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.833 |
| SRR9715740 | Leave | 10.210 |
| SRR9715741 | Leave | 12.679 |
| SRR9715739 | Root | 1.444 |
| SRR9715742 | Root | 3.773 |
| SRR9715743 | Root | 2.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.284 |
| SRR8749028 | MeJA induced 9h | 18.586 |
| SRR8749029 | MeJA induced 9h | 16.172 |
| SRR8749030 | Uninduced | 24.395 |
| SRR8749031 | Uninduced | 17.735 |
| SRR8749032 | Uninduced | 16.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.955 |
| SRR8400027 | Control-Root | 11.341 |