Gene detail information of Glyur000111s00011064.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62300.1 | 2.00E-62 | WRKY family transcription factor |
| NR | KEH33882.1 | 7.21E-170 | WRKY1b transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9C519|WRKY6_ARATH | 6.00E-96 | WRKY transcription factor 6 |
| trEMBL | tr|A0A072UWD7|A0A072UWD7_MEDTR | 3.00E-170 | WRKY1b transcription factor {ECO:0000313|EMBL:KEH33882.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00111 | 221816 | 225098 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000111s00011064.1 | PF03106.10 | WRKY | 281 | 339 | 2.40E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.023 |
| SRR1783600 | control | 0.024 |
| SRR1783602 | moderate drought stress | 0.048 |
| SRR1811619 | moderate drought stress | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.429 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.839 |
| SRR2967015 | Control (Tissue:root) | 8.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.085 |
| SRR9715740 | Leave | 0.125 |
| SRR9715741 | Leave | 0.254 |
| SRR9715739 | Root | 0.007 |
| SRR9715742 | Root | 0.040 |
| SRR9715743 | Root | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.603 |
| SRR8749028 | MeJA induced 9h | 41.021 |
| SRR8749029 | MeJA induced 9h | 22.634 |
| SRR8749030 | Uninduced | 207.902 |
| SRR8749031 | Uninduced | 63.294 |
| SRR8749032 | Uninduced | 14.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.428 |
| SRR8400027 | Control-Root | 1.065 |