Gene detail information of Glyur000112s00012332.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01350.12.00E-144quinolinate phoshoribosyltransferase
NRXP_004498323.10PREDICTED: probable nicotinate-nucleotide pyrophosphorylase [carboxylating]-like isoform X2 [Cicer arietinum]
COGYP_003289511.17.00E-92nicotinate-nucleotide pyrophosphorylase [Rhodothermus marinus DSM 4252]
Swissprottr|Q9ZU32|NADC_ARATH0Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic (Precursor)
trEMBLtr|A0A072VQY4|A0A072VQY4_MEDTR0Quinolinate phosphoribosyltransferase, putative {ECO:0000313|EMBL:KEH40550.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00112213079219688+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00767nadC, QPRT EC:2.4.2.19 Nicotinate and nicotinamide metabolism map00760


Gene Ontology

biological_process

GO:0009435  NAD biosynthetic process

GO:0019363  pyridine nucleotide biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004514  nicotinate-nucleotide diphosphorylase (carboxylating) activity

GO:0016763  transferase activity, transferring pentosyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000112s00012332.1PF02749.11QRPTase_N661547.70E-25
Glyur000112s00012332.1PF01729.14QRPTase_C1563374.30E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.211
SRR1783600control14.118
SRR1783602moderate drought stress12.118
SRR1811619moderate drought stress12.024

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.291
DRR006520Root Summer glycyrrhizin high producing strain21.405
DRR006521Root Winter glycyrrhizin high producing strain21.057
DRR006522Root Winter glycyrrhizin high producing strain20.185
DRR006523Root Summer glycyrrhizin low producing strain18.992
DRR006524Root Summer glycyrrhizin low producing strain19.303
DRR006525Leaf Summer glycyrrhizin high producing strain39.042
DRR006526Leaf Summer glycyrrhizin high producing strain38.977

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.715
SRR2868004Drought Stress(Tissue:root)28.029
SRR2967015Control (Tissue:root)25.284

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.097
SRR9715740Leave32.888
SRR9715741Leave31.978
SRR9715739Root5.178
SRR9715742Root8.744
SRR9715743Root8.443

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.610
SRR8749028MeJA induced 9h27.545
SRR8749029MeJA induced 9h23.343
SRR8749030Uninduced16.544
SRR8749031Uninduced12.981
SRR8749032Uninduced11.572

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.493
SRR8400027Control-Root19.775

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved