Gene detail information of Glyur000113s00009436.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38470.10ACT-like protein tyrosine kinase family protein
NRXP_004497215.10PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Cicer arietinum]
COGYP_001958461.13.00E-39hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-80Serine/threonine-protein kinase HT1
trEMBLtr|G7IDD3|G7IDD3_MEDTR0ACT-like tyrosine kinase family protein {ECO:0000313|EMBL:AES62939.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00113105197111811+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0008152  metabolic process


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016597  amino acid binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000113s00009436.1PF01842.20ACT1862322.70E-07
Glyur000113s00009436.1PF07714.12Pkinase_Tyr3005494.70E-72


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.937
SRR1783600control5.904
SRR1783602moderate drought stress5.984
SRR1811619moderate drought stress5.951

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.115
DRR006520Root Summer glycyrrhizin high producing strain6.207
DRR006521Root Winter glycyrrhizin high producing strain2.638
DRR006522Root Winter glycyrrhizin high producing strain2.627
DRR006523Root Summer glycyrrhizin low producing strain3.152
DRR006524Root Summer glycyrrhizin low producing strain3.035
DRR006525Leaf Summer glycyrrhizin high producing strain4.910
DRR006526Leaf Summer glycyrrhizin high producing strain4.662

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.015
SRR2868004Drought Stress(Tissue:root)14.586
SRR2967015Control (Tissue:root)28.070

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.698
SRR9715740Leave3.926
SRR9715741Leave4.467
SRR9715739Root1.465
SRR9715742Root4.548
SRR9715743Root4.150

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h129.097
SRR8749028MeJA induced 9h375.753
SRR8749029MeJA induced 9h271.484
SRR8749030Uninduced254.643
SRR8749031Uninduced445.990
SRR8749032Uninduced409.212

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.345
SRR8400027Control-Root10.026

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved