Gene detail information of Glyur000114s00010455.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G19420.1 | 3.00E-145 | Pectinacetylesterase family protein |
| NR | XP_007158098.1 | 0 | hypothetical protein PHAVU_002G123900g [Phaseolus vulgaris] |
| trEMBL | tr|V7CIR4|V7CIR4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW30092.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 33819 | 47119 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | CE13 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K19882 | NOTUM | EC:3.1.1.98 | Wnt signaling pathway | map04310 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000114s00010455.2 | PF03283.8 | PAE | 13 | 355 | 1.40E-143 |
| Glyur000114s00010455.2 | PF03283.8 | PAE | 356 | 468 | 1.20E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.955 |
| SRR1783600 | control | 4.930 |
| SRR1783602 | moderate drought stress | 6.047 |
| SRR1811619 | moderate drought stress | 5.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.903 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.751 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.876 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.591 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.713 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.130 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.567 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.111 |
| SRR2967015 | Control (Tissue:root) | 7.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 51.798 |
| SRR9715740 | Leave | 26.684 |
| SRR9715741 | Leave | 56.546 |
| SRR9715739 | Root | 1.170 |
| SRR9715742 | Root | 3.705 |
| SRR9715743 | Root | 3.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.482 |
| SRR8749028 | MeJA induced 9h | 14.142 |
| SRR8749029 | MeJA induced 9h | 7.122 |
| SRR8749030 | Uninduced | 8.641 |
| SRR8749031 | Uninduced | 3.468 |
| SRR8749032 | Uninduced | 4.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.991 |
| SRR8400027 | Control-Root | 9.416 |