Gene detail information of Glyur000114s00010461.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G19460.1 | 1.00E-165 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003548705.1 | 0 | PREDICTED: uncharacterized protein LOC100804436 [Glycine max] |
| COG | YP_007055594.1 | 2.00E-19 | glycosyltransferase [Rivularia sp. PCC 7116] |
| trEMBL | tr|I1MMI1|I1MMI1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G17250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 82584 | 84062 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000114s00010461.1 | PF13439.1 | Glyco_transf_4 | 95 | 290 | 1.90E-14 |
| Glyur000114s00010461.1 | PF00534.15 | Glycos_transf_1 | 310 | 456 | 1.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.299 |
| SRR1783600 | control | 8.258 |
| SRR1783602 | moderate drought stress | 4.256 |
| SRR1811619 | moderate drought stress | 4.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.968 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.779 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.539 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.451 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.400 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.798 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.961 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.965 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.151 |
| SRR2967015 | Control (Tissue:root) | 7.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.990 |
| SRR9715740 | Leave | 1.260 |
| SRR9715741 | Leave | 5.043 |
| SRR9715739 | Root | 10.899 |
| SRR9715742 | Root | 27.627 |
| SRR9715743 | Root | 22.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 55.712 |
| SRR8749028 | MeJA induced 9h | 35.795 |
| SRR8749029 | MeJA induced 9h | 12.906 |
| SRR8749030 | Uninduced | 11.709 |
| SRR8749031 | Uninduced | 5.841 |
| SRR8749032 | Uninduced | 2.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.027 |
| SRR8400027 | Control-Root | 8.858 |