Gene detail

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Gene detail information of Glyur000114s00010470.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G31420.2	0	Leucine-rich repeat protein kinase family protein
NR	XP_007158112.1	0	hypothetical protein PHAVU_002G125100g [Phaseolus vulgaris]
COG	YP_001192956.1	1.00E-21	two component regulator [Flavobacterium johnsoniae UW101]
Swissprot	tr\|C0LGF4\|FEI1_ARATH	0	LRR receptor-like serine/threonine-protein kinase FEI 1 (Precursor)
trEMBL	tr\|I1J845\|I1J845_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G35390.1}

Sequence

Transcript Sequence

>Glyur000114s00010470.1
GTTGTACTGTAACGCAGTGCAAGCTACAGGCGTCAATTTTGTGAGTTGTGAGCTGTGACGGGGTTCTAGAGCAAAGGCGTCGGTCGCACGTGCGGTGTGTCCTTGTTCTCACGTGCCGAACAGTCTTGCCTTGCCTTGCTCTCATTGGTTCCCCTTTAACACCCCAAAAGAGCATCTTATTCTCACTTCGCACACACACACACACACACACACTCTCACACACTCGCACTCGCTCTTTGGAATCACACAACACAAATCTCAGGGAGGCAGCACAACGAAGCTAAAAACACAAAGCAAGTGGGTGGGTGGGAGTGAGTGAATGATAGCGGAGGGGGTTTTGTTTTAACGTTTTTTTTGTTTGNTATTCCTTTACAGCTCAACCTGCATTTCTCTCTCACTTTCGCATCTCAGATCGAAATCTAGGCAGTGTCTACGTTTGTCTACACTGCACAGCTGATGTCCGTACCAACCAGATAAACTACATGGTGGAGAGACATTTTAGATACTGCTGTCTCAGATGACTTTTGTTAGCCATACTATTCTTGAACAGTGTTGCTATGGGCATTTGTCTGACGAAATGGCAATGGCTGTGGCTTCTTTTTGTTCTGCTGATACATATTGTAATTAATACAAGTAAAGCGATCACTCCTGATGGTGAGGCACTTATCAACTTCAGGACAGCAGTTGTTACCTCTGATGGTGTCCTGTTACAATGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTAACACATCTGAGTCTATCTTACCATAAGTTAAGTGGGTTTTTACCACCTGACCTTGGGAAGCTTGAGCAACTGAAAGTTCTTGCTCTTCATAACAACAACTTCTATGGGTCAATTCCACCAGAATTGGGAAATTGCACTGAATTGCAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTTAGCGGTAATATTCCAGCATCACTTGGGAAGTTGTATAATCTCAAAAATTTCAATGTATCAACCAATTTTCTGGTCGGACCAATACCTTCTGATGGTGTCCTTGCCAACTTTACTGTAAGCTCCTTTGTTGGAAATCGAGGTTTGTGTGGATTGCAAATCAATTCAACATGCAAAGATGATGGTTCCCCTGGGACAAATAGTCAATCTACTTCCTTGGACCAAAGTCAAATGGGAAAGAAGAAATATTCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTTGGCGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAAAATAAGCCTGGCAATGGATGTTGGTGCAGTGATGTTTCATGGAGACCTACCATATTCTTCAAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGCTTGCAATGGATGATGGGAATGTGTTTGCTTTGAAAAGGATCGTAAAGTTGAATGAAGGCTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTACCTAGTGAACTTACGAGGATATTGCAATTCACCTACCTCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCGTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGAGACATAAAATCGAGCAACATTCTGCTTGATGGAAAATTGGATGCCCGGGTCTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAAGAATCTCACATCACTACCATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGGTAAGCAATACAGAATGGATGTTTATCTGCTTATCTGCTTAACTCCATATTGTTTGAGCAATCCTCTATACTTCATTGCAGAGTACATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTGTATAGTTTTGGTGTGCTGACGCTTGAAGTACTTAGTGGAAAGCGGCCAACAGATGCATCGTTCATTGAGAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTTATTACCGAGAATAGGCCGAGGGAAATTGTGGATCCACTATGTGATGGGGTGCAGGTGGAGAGCCTTGATGCCTTGCTCTCTGTGGCTATTCAATGTGTTTCCTCAAGTCCAGAAGATCGACCCACTATGCACCGAGTGGTCCAGTTGCTTGAATCGGAGGTTGTAACTCCATGCCCAAGTGACTTCTATGACTCCAACTCTGAGTAGAAAGGCTTGCGAAGACAAATTGACGGTATGTTGTGTTTGCATCATCCATGTCACTTGCAAGTCAGAAGCGATGAAAGAGGCTCAGAATCAGCACCGCAACTTTTCATCTCAATTGCATTCATTCCTAAAGTGAGTTTATAATGAAAGATGCCCTTCTTTACACTACTTCACCACAGAAGTTGTTCTTCGTCGGATGTCACACGTTCACGCATTTCTTTGTCTTCCTGAATGGAGTTGCATGTGATCCTTGATCGTGGTTCTCCCTTCCTCTTTTGTGTTTCCCCCACCCTCTTTTGTTAGCATTTGTAATCTTAGTCACATTTGTTCACTCCAATTTAAGTGTATATGAATATGTATAAGAACAGAAAGTCCACTTTTGCAAGTGATTCTTGTTATTTATTTTTGTAATATATATGTTTT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00114	116020	123671	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000114s00010470.1	PF08263.7	LRRNT_2	31	69	6.90E-10
Glyur000114s00010470.1	PF00560.28	LRR_1	146	168	0.063
Glyur000114s00010470.1	PF00069.20	Pkinase	317	589	9.60E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	49.357
SRR1783600	control	49.612
SRR1783602	moderate drought stress	44.090
SRR1811619	moderate drought stress	43.722

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	41.173
DRR006520	Root Summer glycyrrhizin high producing strain	40.598
DRR006521	Root Winter glycyrrhizin high producing strain	35.321
DRR006522	Root Winter glycyrrhizin high producing strain	34.553
DRR006523	Root Summer glycyrrhizin low producing strain	31.131
DRR006524	Root Summer glycyrrhizin low producing strain	31.269
DRR006525	Leaf Summer glycyrrhizin high producing strain	30.839
DRR006526	Leaf Summer glycyrrhizin high producing strain	30.561

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	55.354
SRR2868004	Drought Stress(Tissue:root)	50.328
SRR2967015	Control (Tissue:root)	50.506

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	32.573
SRR9715740	Leave	42.552
SRR9715741	Leave	33.645
SRR9715739	Root	15.415
SRR9715742	Root	38.066
SRR9715743	Root	31.992

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.947
SRR8749028	MeJA induced 9h	17.313
SRR8749029	MeJA induced 9h	16.384
SRR8749030	Uninduced	6.811
SRR8749031	Uninduced	3.004
SRR8749032	Uninduced	3.743

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	68.594
SRR8400027	Control-Root	87.709