Gene detail information of Glyur000114s00010477.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38250.13.00E-30Homeodomain-like superfamily protein
NRXP_003516496.13.39E-170PREDICTED: trihelix transcription factor GT-3b-like [Glycine max]
Swissprottr|O80450|TGT3B_ARATH8.00E-47Trihelix transcription factor GT-3b
trEMBLtr|K7K3Z3|K7K3Z3_SOYBN1.00E-170Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G35370.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00114146988150272-


Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003682  chromatin binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000114s00010477.1PF13837.1Myb_DNA-bind_4491322.40E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.490
SRR1783600control6.508
SRR1783602moderate drought stress5.640
SRR1811619moderate drought stress5.627

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.460
DRR006520Root Summer glycyrrhizin high producing strain15.077
DRR006521Root Winter glycyrrhizin high producing strain7.843
DRR006522Root Winter glycyrrhizin high producing strain7.496
DRR006523Root Summer glycyrrhizin low producing strain25.796
DRR006524Root Summer glycyrrhizin low producing strain26.045
DRR006525Leaf Summer glycyrrhizin high producing strain5.194
DRR006526Leaf Summer glycyrrhizin high producing strain5.181

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.350
SRR2868004Drought Stress(Tissue:root)13.539
SRR2967015Control (Tissue:root)13.702

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.893
SRR9715740Leave10.837
SRR9715741Leave12.331
SRR9715739Root2.368
SRR9715742Root14.869
SRR9715743Root11.868

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.714
SRR8749028MeJA induced 9h58.831
SRR8749029MeJA induced 9h74.119
SRR8749030Uninduced61.512
SRR8749031Uninduced61.183
SRR8749032Uninduced39.203

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.272
SRR8400027Control-Root15.068

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved