Gene detail information of Glyur000114s00010485.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23640.20heteroglycan glucosidase 1
NRKEH27669.10neutral alpha-glucosidase [Medicago truncatula]
COGNP_812211.16.00E-152alpha-glucosidase [Bacteroides thetaiotaomicron VPI-5482]
Swissprottr|B9F676|GLU2A_ORYSJ2.00E-71Probable glucan 1,3-alpha-glucosidase (Precursor)
trEMBLtr|A0A072UCZ2|A0A072UCZ2_MEDTR0Neutral alpha-glucosidase {ECO:0000313|EMBL:KEH27669.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00114195475200680+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000114s00010485.1PF13802.1Gal_mutarotas_21552204.20E-12
Glyur000114s00010485.1PF01055.21Glyco_hydro_312455979.30E-109


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.222
SRR1783600control26.876
SRR1783602moderate drought stress21.876
SRR1811619moderate drought stress21.768

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.489
DRR006520Root Summer glycyrrhizin high producing strain18.607
DRR006521Root Winter glycyrrhizin high producing strain3.458
DRR006522Root Winter glycyrrhizin high producing strain3.395
DRR006523Root Summer glycyrrhizin low producing strain19.167
DRR006524Root Summer glycyrrhizin low producing strain18.922
DRR006525Leaf Summer glycyrrhizin high producing strain11.577
DRR006526Leaf Summer glycyrrhizin high producing strain11.546

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.365
SRR2868004Drought Stress(Tissue:root)27.614
SRR2967015Control (Tissue:root)24.766

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.410
SRR9715740Leave11.972
SRR9715741Leave11.029
SRR9715739Root8.956
SRR9715742Root18.448
SRR9715743Root15.438

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.474
SRR8749028MeJA induced 9h11.261
SRR8749029MeJA induced 9h2.003
SRR8749030Uninduced2.157
SRR8749031Uninduced1.478
SRR8749032Uninduced1.329

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.884
SRR8400027Control-Root32.034

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved