Gene detail

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Gene detail information of Glyur000115s00008217.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G14480.1	5.00E-133	Protein kinase superfamily protein
NR	XP_004486832.1	0	PREDICTED: serine/threonine-protein kinase fray2-like [Cicer arietinum]
COG	YP_006528519.1	3.00E-25	serine/threonine protein kinase with PASTA sensor(s) [Melioribacter roseus P3M-2]
Swissprot	tr\|O23304\|BLUS1_ARATH	5.00E-168	Serine/threonine-protein kinase BLUS1
trEMBL	tr\|A2Q436\|A2Q436_MEDTR	0	Serine/Threonine kinase family protein {ECO:0000313\|EMBL:AES67851.1}

Sequence

Transcript Sequence

>Glyur000115s00008217.1
ATGNCAACCAGCAGNAGAGAAGAAGTTCAAGTTCCGAAAAGGGTCCAATACCCGTTGGACCCTTGCTCCTACAAGATAATCGACGAGATCGGCGCCGGTGTAAGCGCCATTGTCTACAAGGCAATATGCCTTCCCGTCAACTCCACACCAGTCGCCATCAAATCCATCGACCTGGACCGTTCCCGGCCCGACCTGGACGATGTTCGCCGTGAGGCAAAGNCCCTCTCTTTGCTTTCTCACCCCAACATCCTCAAAGCCCACTGTTCCTTCACCGTAGACCGTCGCCTGTGGGTGGTGATGCCCTTCATGGCGGGAGGGTCTCTCCAATCCATCATCTCCCACTCATTCCCACAAGGCCTAACAGAACCATGCATCGCCGTGGTTCTCAAAGACACCCTCAATGCTCTTTCCTACCTCCACGGCCAGGGACACCTCCACAGAGACATTAAGGCCGGTAACATCCTTGTTGATTCAAACGGGTCCGTGAAGCTCGCAGATTTCGGTGTCTCTGCCTCCATTTACGACTCCTCTGTTTCTTCCTCTGTTTCTAATTCCTCTGCCTCTTCCTCTGCTTCTTCTTCTCTCATGCTCACTGATTTTGCCGGCACGCCGTATTGGATGGCCCCAGAGGTGATTCACTCGCACACTGGCTACAGTTTCAAGGCTGATATATGGTCTTTTGGGATAACTGCTTTGGAGCTTGCACATGGGAGGCCACCACTCTCTCACCTTCCACCTTCCAAGTCCATGATTCTCAAGATCACCAAACGGTTTCGGTTCTCCGATTTGGACAACAAAATTAAGGGACACGGTGGCAACAACAAGTTCTCAAAGGGTTTTAAGGACATGGTGGCTTCTTGCCTCGATCAGGACCCTTCCAAGAGACCCTCTGCTGAGAAACTCCTCAAGCACCCCTTCTTCAAAAACTGCAAGGGCAAGNGCTCTGAGTTTCTCGTGAAGAATTTGCTGCAAGGATTGCCTAGCGTTGAGAAGAGGTATAAAGAAAGCAAGGNTCAGGTTCTGCATGATGATGAGGATGATGATGATGACCCCACGATGCAGAAACAGAGAAGGATCAGTGGTTGGAACTTCAATGAAGATGGGTTGAAGCTTGAGCCGGTATTCCCAAAGGACCATTCCACGGAAGAGGATGCAGTGGTTAAACAAGTTCGGTTTGGAGAAGAATTAATGGTGATCCAAGAGATGCGTGGTGGTACTGGTACTGGTAAGATAGGCGAGTTAGAGGAGCATGCTGCTGATGTACATAATGTGGATCAGGTGGTTGGGTCTGATCATGGGGNGGAAAAAGTGGGTGGTGGTGTTGAGGTGGTTGGAGAAAGGGTTGAGAATGTGATGAAAAACCTGCAAAACCGTGAGGCCATGTTGGCCACCCTGAATGTGCTGAAAGGGAGCTTGGAACAAGAGCTGGGGCAAGTCNAGTTTCTGATGAATCTGATACGTGGAGAGGAGAATATTCATGTGTCTGTGGCTGATCATAGTGAGGACTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00115	10387	11895	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000115s00008217.1	PF00069.20	Pkinase	24	307	7.70E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.022
SRR1783600	control	0.024
SRR1783602	moderate drought stress	0.554
SRR1811619	moderate drought stress	0.570

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.144
DRR006520	Root Summer glycyrrhizin high producing strain	0.142
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.011
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.972
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.828

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.030
SRR2868004	Drought Stress(Tissue:root)	0.033
SRR2967015	Control (Tissue:root)	0.034

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	4.127
SRR9715740	Leave	2.249
SRR9715741	Leave	1.676
SRR9715739	Root	0.000
SRR9715742	Root	0.138
SRR9715743	Root	0.088

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.047
SRR8749028	MeJA induced 9h	0.044
SRR8749029	MeJA induced 9h	0.043
SRR8749030	Uninduced	0.002
SRR8749031	Uninduced	0.101
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.067
SRR8400027	Control-Root	0.126