Gene detail information of Glyur000115s00008251.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G55020.10lipoxygenase 1
NRP09918.10RecName: Full=Seed linoleate 9S-lipoxygenase-3; AltName: Full=Lipoxygenase-3 [Pisum sativum]
Swissprottr|P09918|LOX3_PEA0Seed linoleate 9S-lipoxygenase-3
trEMBLtr|G7IS30|G7IS30_MEDTR0Lipoxygenase {ECO:0000256|RuleBase:RU003975}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00115198278202639+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15718LOX1_5 EC:1.13.11.58 Linoleic acid metabolism map00591


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005515  protein binding

GO:0016491  oxidoreductase activity

GO:0016702  oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000115s00008251.1PF01477.18PLAT721339.80E-06
Glyur000115s00008251.1PF00305.14Lipoxygenase1387771.2e-316


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.046
SRR1783600control0.031
SRR1783602moderate drought stress0.129
SRR1811619moderate drought stress0.162

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.960
DRR006520Root Summer glycyrrhizin high producing strain0.956
DRR006521Root Winter glycyrrhizin high producing strain0.046
DRR006522Root Winter glycyrrhizin high producing strain0.045
DRR006523Root Summer glycyrrhizin low producing strain1.470
DRR006524Root Summer glycyrrhizin low producing strain1.505
DRR006525Leaf Summer glycyrrhizin high producing strain0.320
DRR006526Leaf Summer glycyrrhizin high producing strain0.407

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.657
SRR2868004Drought Stress(Tissue:root)6.688
SRR2967015Control (Tissue:root)5.551

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.080
SRR9715740Leave0.371
SRR9715741Leave0.183
SRR9715739Root0.021
SRR9715742Root0.293
SRR9715743Root0.099

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.060
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.093
SRR8749031Uninduced0.000
SRR8749032Uninduced0.024

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.122
SRR8400027Control-Root6.275

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved