Gene detail

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Gene detail information of Glyur000115s00008256.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G12000.1	1.00E-165	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_006595468.1	0	PREDICTED: putative U-box domain-containing protein 53-like [Glycine max]
COG	YP_005004992.1	5.00E-26	phosphotransferase enzyme family protein [Pediococcus claussenii ATCC BAA-344]
Swissprot	tr\|Q9FKG5\|PUB51_ARATH	2.00E-108	Serine/threonine-protein kinase
trEMBL	tr\|K7KZG0\|K7KZG0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G03970.2}

Sequence

Transcript Sequence

>Glyur000115s00008256.2
ATGATGGGTATGGCTTCAAATTATGCAGAAGAAGGGTCCACCGTGATCGCCATTGATAGAGACCGGAACAGCCAACGCGCTGTTCAGTGGGCTGTGGATAACCTCTTGAACAATAACTCCTCCTGCACCCTCATTCATGTCATAACCAATAAGATCCTCTATCCCCCAGATGAGTCTGATGCTGTCCCTAAACAAGGTCGTCCACCAACAGAAGAAGAATTGCACCAGCTTTTTCTTCCCTTCAGAGGATTTTGTGCAAGAAAAGGGATCGTAGCAAAGGAGTTGGTCCTGCTTGACATTGATGTTCCATGTGCGCTTGCTGATTACATCATTGACAACTCTATCACCAACATTGTTGTTGGTGCTCCCGGCCGCTGGAATGCTCTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAGTCAGGTCTGTGCCAGAGTCTTGCATGGTTCACATTGTATCAAAAGGGAAAGTGCAGAGTATTCGACCACCTGGTCGTTCTCAAAACATTGGTATCACACAAACAAGATCTACAAAAGACATTATTTCTAGCCCCAAGGGAAATTCTCCATCCAAAGATTTAAACAGAAAATCATTGAAATATGGAATTTGGCGAGGATCAAGCAACGATGGTTCCCCCTTGGGTCAAAACAACGGTGCAAACAATGCAACACAGGTNGCAAGATGTATGTCCAATATTGAGACTTGTTCAGCAAGGCTATCAGANGATACAAGTTCCCCAACCGGTGACACTTCAAAGCAACTTGGTTCTCAATTGACTGAGACATCGCATGAAAACCAAGATGTGAATAACATGGAGGGTGAAATAAGGAAACTAAAACTAGAACAGAAGAGAACAACAAAGAAGTCTAAGTCGGCCAGAGAAGCTGTTGAAGCAAAACAGAAGGCAATGGAAGTTGAAAAGTTTAGGCAAGAAGAAAGGAACATGGAAAAGGTTAGGCTTGTTGAAGAGGCTGCATTGGCTTTGGTAGAGGTAGAGACAGCTACGGAGTCAGCTGAAATGAAGACTCAGAAGAGAAAGCAGGCCGAAATTAGAGCTATGCATGAAGATGAAGAAGCAGAAGAGAGGAAGAGAGCATTAAATGCAAGTGCACGTAACAATATTCGATTCAGAAGATACAATATTCAAGAAATTGAGGTTGCAACAAATTACTTTGACATTGCTCTCAAAGTTGGTGAGGGTGGATATGGACCTGTTTTCAGAGGGGTGCTTGATCACACTGATGTTGCTGTCAAGGCCTTGAGACCAGACTTATCCCAAGGGGAGAGGCAATTTCATCAAGAGGTCCTTGTTTTGAGCACCATAAAACATCCGAACATTGTCACACTTTTAGGTGCATGTCCAGAGTACGGATGCCTTGTGTATGAGTATGTAGAAAATGGCAGCTTAGAAGATCGGCTTCTCCAGAAGGATAACACTCCACCAATTCCATGGAAGGCCAGGTTCAAAATAGCATCAGAGATTGCCACAGGCCTTCTTTTCCTTCACCAGACAAAGCCCGAACCGGTTGTGCACCGCGACCTCAAGCCAGCAAACATTCTCTTAGACAAAAACTATGGGAGCAAGATNACTGATGTGGGTTTGGCAAGGCTTGTTCCCCCTTCTGTGGCCAACAAAACAACACAATACCACAAGACAACTGCAGCTGGAACATTATGCTATATTGACCCTGAGTATCAACAAACAGGACTATTGGGTGTGAAATCAGACATATACTCATTAGGTGTGATGCTGCTACAGATCATTACTGGTAAGCCTCCTATGGGTGTGGCCCGCTTGGTTGAGGAGGCTATCCAGAAGGGTGAATTTGCAGAGGTGCTTGATCCAAATGTCACAGATTGGCCCCTTGAAGATACTCTATCGTATGCTAAATTGGCTTTGAAGTGTTGTGAGCTGAGAAAACGGGACAGACCTAACCTTGGCTCTGTCATTTTGCCAGAGCTCATTCGACTCAGAGATTTGGAACTGGGAGAATGAACCACCAGAAAAAGGTCAAGGTTAGTCAACCTGTGTGGACTAACTGATCAATTTAGCGACACCTGCACCTGCATTGTGCTTTCTGGTGTTAATCAAGACTCCTAGTTTGTATTGTACAGTTTAATAACTATACACTAACACAGTAGTGTAAATAGGTTTCCAGAAGTAATTACATTANGATGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00115	222843	227603	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0006950 response to stress

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000115s00008256.2	PF00582.21	Usp	15	154	3.10E-10
Glyur000115s00008256.2	PF00069.20	Pkinase	398	651	8.00E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.327
DRR006520	Root Summer glycyrrhizin high producing strain	2.302
DRR006521	Root Winter glycyrrhizin high producing strain	5.553
DRR006522	Root Winter glycyrrhizin high producing strain	5.004
DRR006523	Root Summer glycyrrhizin low producing strain	2.949
DRR006524	Root Summer glycyrrhizin low producing strain	3.255
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.621
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.667

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.110
SRR2868004	Drought Stress(Tissue:root)	0.144
SRR2967015	Control (Tissue:root)	0.041

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.082
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.031
SRR8749028	MeJA induced 9h	0.028
SRR8749029	MeJA induced 9h	0.052
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.032
SRR8749032	Uninduced	0.025

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.027
SRR8400027	Control-Root	0.000