Gene detail information of Glyur000115s00008260.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G29840.10Pyridoxal-5'-phosphate-dependent enzyme family protein
NRXP_004486860.10PREDICTED: threonine synthase, chloroplastic-like [Cicer arietinum]
COGYP_002463167.10threonine synthase [Chloroflexus aggregans DSM 9485]
Swissprottr|Q9MT28|THRC_SOLTU0Threonine synthase, chloroplastic (Precursor)
trEMBLtr|G7IS24|G7IS24_MEDTR0Threonine synthase-like protein {ECO:0000313|EMBL:AES67804.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00115234457236091-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01733thrC EC:4.2.3.1 Biosynthesis of amino acids map01230
Glycine, serine and threonine metabolismmap00260
Vitamin B6 metabolismmap00750


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process


molecular_function

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000115s00008260.1PF00291.20PALP1974896.70E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control57.417
SRR1783600control50.107
SRR1783602moderate drought stress42.131
SRR1811619moderate drought stress42.273

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain49.349
DRR006520Root Summer glycyrrhizin high producing strain48.569
DRR006521Root Winter glycyrrhizin high producing strain27.954
DRR006522Root Winter glycyrrhizin high producing strain28.084
DRR006523Root Summer glycyrrhizin low producing strain74.851
DRR006524Root Summer glycyrrhizin low producing strain75.547
DRR006525Leaf Summer glycyrrhizin high producing strain24.636
DRR006526Leaf Summer glycyrrhizin high producing strain25.237

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)66.691
SRR2868004Drought Stress(Tissue:root)55.924
SRR2967015Control (Tissue:root)56.057

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.248
SRR9715740Leave13.575
SRR9715741Leave11.469
SRR9715739Root61.979
SRR9715742Root57.560
SRR9715743Root59.651

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.858
SRR8749028MeJA induced 9h43.325
SRR8749029MeJA induced 9h23.433
SRR8749030Uninduced27.554
SRR8749031Uninduced12.820
SRR8749032Uninduced18.457

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.942
SRR8400027Control-Root32.395

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved