Gene detail information of Glyur000115s00008276.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G43480.12.00E-129Peroxidase superfamily protein
NRKEH39498.10peroxidase family protein [Medicago truncatula]
Swissprottr|O22862|PER26_ARATH2.00E-161Probable peroxidase 26 (Precursor)
trEMBLtr|A0A072VDI7|A0A072VDI7_MEDTR0Peroxidase family protein {ECO:0000313|EMBL:KEH39498.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00115310841313032-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000115s00008276.1PF00141.18peroxidase543008.10E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.563
SRR1783600control3.299
SRR1783602moderate drought stress4.235
SRR1811619moderate drought stress4.431

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.218
DRR006520Root Summer glycyrrhizin high producing strain5.850
DRR006521Root Winter glycyrrhizin high producing strain9.557
DRR006522Root Winter glycyrrhizin high producing strain9.329
DRR006523Root Summer glycyrrhizin low producing strain9.786
DRR006524Root Summer glycyrrhizin low producing strain9.951
DRR006525Leaf Summer glycyrrhizin high producing strain1.690
DRR006526Leaf Summer glycyrrhizin high producing strain1.553

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)74.687
SRR2868004Drought Stress(Tissue:root)31.903
SRR2967015Control (Tissue:root)28.444

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.234
SRR9715740Leave1.933
SRR9715741Leave3.665
SRR9715739Root0.386
SRR9715742Root1.970
SRR9715743Root1.723

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.650
SRR8749028MeJA induced 9h15.688
SRR8749029MeJA induced 9h16.058
SRR8749030Uninduced12.504
SRR8749031Uninduced4.781
SRR8749032Uninduced9.397

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.393
SRR8400027Control-Root2.264

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved