Gene detail information of Glyur000116s00009221.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50420.10O-fucosyltransferase family protein
NRXP_003627474.10GDP-fucose protein-O-fucosyltransferase [Medicago truncatula]
trEMBLtr|G7L9X3|G7L9X3_MEDTR0GDP-fucose protein O-fucosyltransferase {ECO:0000313|EMBL:AET01950.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00116116955119687+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03691POFUT EC:2.4.1.221 Other types of O-glycan biosynthesis map00514


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000116s00009221.1PF10250.4O-FucT3775251.20E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.908
SRR1783600control39.258
SRR1783602moderate drought stress37.097
SRR1811619moderate drought stress37.280

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.862
DRR006520Root Summer glycyrrhizin high producing strain24.367
DRR006521Root Winter glycyrrhizin high producing strain10.910
DRR006522Root Winter glycyrrhizin high producing strain10.507
DRR006523Root Summer glycyrrhizin low producing strain24.321
DRR006524Root Summer glycyrrhizin low producing strain24.623
DRR006525Leaf Summer glycyrrhizin high producing strain12.434
DRR006526Leaf Summer glycyrrhizin high producing strain12.880

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.621
SRR2868004Drought Stress(Tissue:root)16.544
SRR2967015Control (Tissue:root)17.312

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.390
SRR9715740Leave9.002
SRR9715741Leave11.529
SRR9715739Root54.386
SRR9715742Root29.279
SRR9715743Root34.665

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.528
SRR8749028MeJA induced 9h6.649
SRR8749029MeJA induced 9h4.146
SRR8749030Uninduced0.307
SRR8749031Uninduced0.078
SRR8749032Uninduced0.451

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.676
SRR8400027Control-Root38.967