Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000116s00009227.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G53730.1	0	STRUBBELIG-receptor family 6
NR	XP_006604928.1	0	PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6-like isoform X1 [Glycine max]
COG	YP_004775215.1	1.00E-15	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9LUL4\|SRF7_ARATH	0	Protein STRUBBELIG-RECEPTOR FAMILY 7 (Precursor)
trEMBL	tr\|I1JS65\|I1JS65_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G42360.1}

Sequence

Transcript Sequence

>Glyur000116s00009227.2
CGTAAATAAAATTTCTGTGGCTTTGGATTCTTCTGGCAATTCGTGCTGGCCAGCTTTATTTGGCTATGGGAGCTGCATAAACCCCTAAAATTATTAGAAAAATTGAAACTTGGCAAAAAGGGCTAACTGCAAATCCCTTTTGGGTTTTTGGGTAGGAAGAATTTTGTGAGATGGTGGAGGTTGCAAGGCGGCTGCTGCTGCTGCTCTTCAGCACTTGCATTCTTCGTTGGTTCCCCAATGGTGCCACTGCCACAGATCCAAGTGATGTTGCTGCTGTAAAGGCTATGTTTCAAAGCATGAACTCACCATCCCAGCTTGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAGTCTTGGAAAGGNATTACTTGTTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTGACTGGAATGTTGGCTTATGGATTACAAGGCTTGACATCTATGACCAACCTAGACCTGAGTAACAACAATCTTGTAGGAGCCATACCATACCAACTTCCTCCANACATGCAGCGCTTAAATCTTGCTTATAATAACTTGACTGGGACAGTCCCTTACTCTATTTCTAATTTGACCTCTCTCACAGACCTGTGAGCAAGTGGACTAAAATCTTTTTCTTGTTNCAGAGATCTCTCTTTCAATTCTCTGACAGGTGACCTCCCTCAGACTTTGAGCTCGCTTTCAAGCATAACCACCATGTATCTGCAAAACAACCAGTTTACAGGCACTATTGATGTTCTTGCTAATCTGCCTCTGGATAGTCTGAATGTGGAAAATAATCATTTTACGGGATGGATACCAGAACAGTTGAAAAAAATAGACCTACAGACCGGAGGTAACGCATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACGCCTCCAGCAGGACCAGCACCTAAAAGCAACCGACACCACAAATCTGGTGGTGGAAGTACCACTGGCCAAGATGCTGGCAGTGGCACAATTGACGAGGACAAAAAATCTGGAATAGGAGTTGGTGGCATAGCTGGAATTGTGATCTCCGTCATTGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAANAAGTCATCTCCAGATTTAGAAAAGCTGGGCAATCAGTCTTCTGCTCCTCTTCCTTCAAATGAAGTGCAAGTTCAAAATTTAGCAGTTGAGTCTGTGCAAACTAACTTGTTATCCAAAGTAACTCGATATACATGTCATAATGCAGAAGTGAAGTCTGTGCAAACATCTTCTGTAATTGACATGAAGACATTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGACAATGAATTCTCAAAGAAGCCCACTATTGTCAAGAAGGCTGTAGCAGCTCCTGCAGATGTACAATCATATTCTATAGCTGATCTGCAAATTGCTACTGGCAGCTTCAGTGTGGATCATCTTGTAGGTGAAGGGTCCTTTGGGCGTGTGTACCGTGCTCAATTTGATGACGGAAAGGTANTTCATATCTGTTATTCCTGCAATTCCACTCTATGTTTGATTCCAGTGGCAAAGATTAGTATCTCCAGAATAGTGTCATGTTACTATGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCATTCCCAGTGATTTTACAGAAATAGTGTCAAACATCTGCCATTTACATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTACGAGTTTCATAAAAATGGATCACTGCGTGANTTCCTTCACCTGTCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTTTGGGGACTGCACGTGCTTTAGAATACCTACATGAAGTTTGTTCGCCATCAGTTGTTCATAAGAATATTAAGTCGGCCAATATATTNCTTGACGCAGAGCTTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCAGACCAGATACTGAACCACAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACTCTGAAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAGCTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATTGGAGCAGTCTTTGGTTCGGTGGGCAACNCCCCAACTCCATGACATTGATGCATTGGCTAAAATGGTTGATCCTGAGCTGAAAGGGCTATATCCTGTTAAATCTCTATCACGTTTTGCTGATGTTATTGCTCTATGCGTTCAGCCGGAGCCTGAATTCCGACCGCCTATGTCAGAAGTGGTTCAGGCACTCGTGCGGTTGGTGCAGCGAGCTAACATGAGCAGGCGAACCACATTTGGAAGTGATCACGGAGGATCACAACGAGGGAGTGATGAGCCAGCTATACGAGGCATCTAAATCCCTCGCCCTTGCCCTTGTGTTGGTTACAATGATGCCTCCAAATTAAGGAAACGTAGTTATATTTTTTTTAACCCCTCAATCTATACGTCTTTGTAAGTTAGTTTGGTTGCGCCTTTGATCAAACAAGTTAGACAACGGGTGATGGCATGTTGTTTGAGCAAGTATAGTACTTTTACTTGCAATTTGTAATATAAATTCAATTAGTTAACTGGTTGCAAAGTT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00116	137762	144695	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.1.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000116s00009227.2	PF07714.12	Pkinase_Tyr	252	547	3.60E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	78.189
SRR1783600	control	78.943
SRR1783602	moderate drought stress	71.785
SRR1811619	moderate drought stress	71.566

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	56.182
DRR006520	Root Summer glycyrrhizin high producing strain	55.682
DRR006521	Root Winter glycyrrhizin high producing strain	38.394
DRR006522	Root Winter glycyrrhizin high producing strain	37.610
DRR006523	Root Summer glycyrrhizin low producing strain	31.300
DRR006524	Root Summer glycyrrhizin low producing strain	30.650
DRR006525	Leaf Summer glycyrrhizin high producing strain	28.617
DRR006526	Leaf Summer glycyrrhizin high producing strain	28.460

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	68.890
SRR2868004	Drought Stress(Tissue:root)	52.331
SRR2967015	Control (Tissue:root)	49.227

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	42.749
SRR9715740	Leave	40.385
SRR9715741	Leave	40.648
SRR9715739	Root	33.599
SRR9715742	Root	52.840
SRR9715743	Root	52.279

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	47.918
SRR8749028	MeJA induced 9h	38.911
SRR8749029	MeJA induced 9h	35.924
SRR8749030	Uninduced	9.502
SRR8749031	Uninduced	6.989
SRR8749032	Uninduced	10.563

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	107.802
SRR8400027	Control-Root	111.453