Gene detail information of Glyur000116s00009229.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G17260.10autoinhibited H(+)-ATPase isoform 10
NRKHG23806.10ATPase 10, plasma membrane-type -like protein [Gossypium arboreum]
COGNP_617732.19.00E-89H(+)-transporting ATPase [Methanosarcina acetivorans C2A]
Swissprottr|Q43128|PMA10_ARATH0ATPase 10, plasma membrane-type
trEMBLtr|B9RUL2|B9RUL2_RICCO0H(+)-transporting atpase plant/fungi plasma membrane type, putative {ECO:0000313|EMBL:EEF44999.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00116152382161642-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01535PMA1, PMA2 EC:3.6.3.6 Oxidative phosphorylation map00190


Gene Ontology

cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000116s00009229.2PF00690.21Cation_ATPase_N971606.30E-14
Glyur000116s00009229.2PF00122.15E1-E2_ATPase2142778.60E-15
Glyur000116s00009229.2PF00702.21Hydrolase3064381.20E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.087
SRR1783600control0.088
SRR1783602moderate drought stress0.186
SRR1811619moderate drought stress0.204

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.512
DRR006520Root Summer glycyrrhizin high producing strain0.462
DRR006521Root Winter glycyrrhizin high producing strain0.466
DRR006522Root Winter glycyrrhizin high producing strain0.334
DRR006523Root Summer glycyrrhizin low producing strain0.693
DRR006524Root Summer glycyrrhizin low producing strain0.642
DRR006525Leaf Summer glycyrrhizin high producing strain7.318
DRR006526Leaf Summer glycyrrhizin high producing strain7.437

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.321
SRR2868004Drought Stress(Tissue:root)0.075
SRR2967015Control (Tissue:root)0.205

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.182
SRR9715740Leave18.580
SRR9715741Leave12.530
SRR9715739Root0.016
SRR9715742Root0.042
SRR9715743Root0.013

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.086
SRR8749028MeJA induced 9h0.042
SRR8749029MeJA induced 9h0.118
SRR8749030Uninduced0.008
SRR8749031Uninduced0.019
SRR8749032Uninduced0.003

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.175
SRR8400027Control-Root0.202

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved