Gene detail information of Glyur000116s00009233.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72300.10Leucine-rich receptor-like protein kinase family protein
NRXP_003520891.10PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max]
COGYP_004775215.11.00E-32RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9C7S5|PSYR1_ARATH0Tyrosine-sulfated glycopeptide receptor 1
trEMBLtr|V7B3K7|V7B3K7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW11041.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00116180752184072-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000116s00009233.1PF08263.7LRRNT_260937.20E-06
Glyur000116s00009233.1PF13855.1LRR_81071688.50E-07
Glyur000116s00009233.1PF00560.28LRR_11902120.047
Glyur000116s00009233.1PF00560.28LRR_13383580.84
Glyur000116s00009233.1PF13855.1LRR_83624225.60E-07
Glyur000116s00009233.1PF13516.1LRR_65125290.17
Glyur000116s00009233.1PF00560.28LRR_16496630.73
Glyur000116s00009233.1PF00069.20Pkinase82310911.70E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.763
SRR1783600control2.943
SRR1783602moderate drought stress3.220
SRR1811619moderate drought stress3.038

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.756
DRR006520Root Summer glycyrrhizin high producing strain1.646
DRR006521Root Winter glycyrrhizin high producing strain1.030
DRR006522Root Winter glycyrrhizin high producing strain0.819
DRR006523Root Summer glycyrrhizin low producing strain2.838
DRR006524Root Summer glycyrrhizin low producing strain2.718
DRR006525Leaf Summer glycyrrhizin high producing strain1.316
DRR006526Leaf Summer glycyrrhizin high producing strain1.341

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.240
SRR2868004Drought Stress(Tissue:root)31.850
SRR2967015Control (Tissue:root)27.228

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.031
SRR9715740Leave3.419
SRR9715741Leave3.968
SRR9715739Root2.519
SRR9715742Root6.194
SRR9715743Root5.917

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.284
SRR8749028MeJA induced 9h107.395
SRR8749029MeJA induced 9h30.695
SRR8749030Uninduced46.338
SRR8749031Uninduced33.240
SRR8749032Uninduced24.477

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.075
SRR8400027Control-Root8.360

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved