Gene detail information of Glyur000116s00009243.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01050.12.00E-111pyrophosphorylase 1
NRXP_003626619.14.93E-147Soluble inorganic pyrophosphatase [Medicago truncatula]
COGYP_679690.13.00E-66inorganic pyrophosphatase [Cytophaga hutchinsonii ATCC 33406]
Swissprottr|Q43187|IPYR_SOLTU1.00E-132Soluble inorganic pyrophosphatase
trEMBLtr|Q2HTA8|Q2HTA8_MEDTR2.00E-147Soluble inorganic pyrophosphatase {ECO:0000313|EMBL:AES82837.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00116259920261990-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01507ppa EC:3.6.1.1 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0006796  phosphate-containing compound metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000287  magnesium ion binding

GO:0004427  inorganic diphosphatase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000116s00009243.1PF00719.14Pyrophosphatase502033.50E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.444
SRR1783600control0.537
SRR1783602moderate drought stress0.512
SRR1811619moderate drought stress0.528

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.675
DRR006520Root Summer glycyrrhizin high producing strain0.922
DRR006521Root Winter glycyrrhizin high producing strain0.347
DRR006522Root Winter glycyrrhizin high producing strain0.091
DRR006523Root Summer glycyrrhizin low producing strain0.261
DRR006524Root Summer glycyrrhizin low producing strain0.273
DRR006525Leaf Summer glycyrrhizin high producing strain0.490
DRR006526Leaf Summer glycyrrhizin high producing strain0.543

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.584
SRR2868004Drought Stress(Tissue:root)10.862
SRR2967015Control (Tissue:root)3.435

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.795
SRR9715740Leave0.877
SRR9715741Leave2.682
SRR9715739Root0.042
SRR9715742Root0.788
SRR9715743Root0.364

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.272
SRR8749028MeJA induced 9h7.583
SRR8749029MeJA induced 9h11.845
SRR8749030Uninduced35.425
SRR8749031Uninduced44.408
SRR8749032Uninduced11.839

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.400
SRR8400027Control-Root3.503

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved