Gene detail information of Glyur000116s00009253.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24470.11.00E-66pseudo-response regulator 5
NRXP_006577355.10PREDICTED: two-component response regulator-like PRR95-like isoform X1 [Glycine max]
COGYP_003951337.12.00E-13Sigma-54 dependent DNA-binding response regulator FrgC [Stigmatella aurantiaca DW4/3-1]
Swissprottr|Q689G6|PRR95_ORYSJ8.00E-102Two-component response regulator-like PRR95
trEMBLtr|K7KH59|K7KH59_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G42221.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00116309635314240-


Gene family

Gene familysubfamily
Transcription Factors FamilyPseudo ARR-B
EAR motif-containing ProteinsPseudo ARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000116s00009253.1PF00072.19Response_reg461577.60E-22
Glyur000116s00009253.1PF06203.9CCT6346768.80E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.366
SRR1783600control18.324
SRR1783602moderate drought stress34.238
SRR1811619moderate drought stress34.106

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.734
DRR006520Root Summer glycyrrhizin high producing strain25.468
DRR006521Root Winter glycyrrhizin high producing strain80.272
DRR006522Root Winter glycyrrhizin high producing strain77.849
DRR006523Root Summer glycyrrhizin low producing strain40.465
DRR006524Root Summer glycyrrhizin low producing strain40.534
DRR006525Leaf Summer glycyrrhizin high producing strain62.265
DRR006526Leaf Summer glycyrrhizin high producing strain62.258

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.541
SRR2868004Drought Stress(Tissue:root)26.560
SRR2967015Control (Tissue:root)30.902

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave84.220
SRR9715740Leave149.013
SRR9715741Leave111.169
SRR9715739Root2.028
SRR9715742Root16.210
SRR9715743Root13.336

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.616
SRR8749028MeJA induced 9h15.456
SRR8749029MeJA induced 9h14.372
SRR8749030Uninduced17.003
SRR8749031Uninduced19.068
SRR8749032Uninduced13.864

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.309
SRR8400027Control-Root10.955

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved