Gene detail information of Glyur000117s00007629.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60200.12.00E-29TARGET OF MONOPTEROS 6
NRXP_004505077.15.02E-109PREDICTED: dof zinc finger protein DOF1.4-like [Cicer arietinum]
Swissprottr|Q9FZA4|DOF14_ARATH2.00E-34Dof zinc finger protein DOF1.4
trEMBLtr|V7BQA0|V7BQA0_PHAVU8.00E-99Uncharacterized protein {ECO:0000313|EMBL:ESW20139.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001177276575012+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000117s00007629.1PF02701.10zf-Dof571162.00E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.467
SRR1783600control24.396
SRR1783602moderate drought stress26.988
SRR1811619moderate drought stress26.774

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.954
DRR006520Root Summer glycyrrhizin high producing strain17.905
DRR006521Root Winter glycyrrhizin high producing strain1.355
DRR006522Root Winter glycyrrhizin high producing strain1.335
DRR006523Root Summer glycyrrhizin low producing strain11.598
DRR006524Root Summer glycyrrhizin low producing strain11.663
DRR006525Leaf Summer glycyrrhizin high producing strain11.703
DRR006526Leaf Summer glycyrrhizin high producing strain11.850

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.687
SRR2868004Drought Stress(Tissue:root)11.410
SRR2967015Control (Tissue:root)12.014

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.200
SRR9715740Leave18.601
SRR9715741Leave20.919
SRR9715739Root17.676
SRR9715742Root12.588
SRR9715743Root16.413

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.220
SRR8749028MeJA induced 9h1.537
SRR8749029MeJA induced 9h1.411
SRR8749030Uninduced1.101
SRR8749031Uninduced0.486
SRR8749032Uninduced0.649

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.528
SRR8400027Control-Root30.087

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved