Gene detail information of Glyur000117s00007632.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28300.1 | 9.00E-24 | AP2/B3-like transcriptional factor family protein |
| NR | XP_006605565.1 | 4.83E-63 | PREDICTED: B3 domain-containing transcription factor LEC2-like isoform X1 [Glycine max] |
| Swissprot | tr|Q1PFR7|LEC2_ARATH | 1.00E-29 | B3 domain-containing transcription factor LEC2 |
| trEMBL | tr|K7N181|K7N181_SOYBN | 2.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G04761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00117 | 90951 | 94227 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000117s00007632.1 | PF02362.16 | B3 | 223 | 286 | 7.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.087 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.009 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.082 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.086 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.060 |
| SRR2967015 | Control (Tissue:root) | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.054 |
| SRR9715740 | Leave | 0.097 |
| SRR9715741 | Leave | 0.132 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.505 |
| SRR8749028 | MeJA induced 9h | 0.366 |
| SRR8749029 | MeJA induced 9h | 0.833 |
| SRR8749030 | Uninduced | 0.003 |
| SRR8749031 | Uninduced | 0.089 |
| SRR8749032 | Uninduced | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.077 |