Gene detail information of Glyur000117s00007636.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32551.24.00E-68LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
NRKEH31037.18.51E-128transcriptional corepressor leunig protein [Medicago truncatula]
COGYP_007134951.13.00E-27WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
Swissprottr|Q9FUY2|LEUNG_ARATH8.00E-77Transcriptional corepressor LEUNIG
trEMBLtr|A0A072UMW9|A0A072UMW9_MEDTR3.00E-128Transcriptional corepressor leunig protein {ECO:0000313|EMBL:KEH31037.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00117107320110009-


Gene family

Gene familysubfamily
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000117s00007636.1PF08513.6LisH16356.80E-06
Glyur000117s00007636.1PF00400.27WD40811184.80E-11
Glyur000117s00007636.1PF00400.27WD401982310.0035
Glyur000117s00007636.1PF00400.27WD402783141.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.278
SRR1783600control0.303
SRR1783602moderate drought stress0.209
SRR1811619moderate drought stress0.206

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.317
DRR006520Root Summer glycyrrhizin high producing strain0.226
DRR006521Root Winter glycyrrhizin high producing strain0.823
DRR006522Root Winter glycyrrhizin high producing strain1.370
DRR006523Root Summer glycyrrhizin low producing strain0.117
DRR006524Root Summer glycyrrhizin low producing strain0.115
DRR006525Leaf Summer glycyrrhizin high producing strain0.125
DRR006526Leaf Summer glycyrrhizin high producing strain0.122

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.253
SRR2868004Drought Stress(Tissue:root)0.209
SRR2967015Control (Tissue:root)0.003

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.253
SRR9715740Leave0.277
SRR9715741Leave0.136
SRR9715739Root0.071
SRR9715742Root0.053
SRR9715743Root0.271

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.458
SRR8749028MeJA induced 9h0.752
SRR8749029MeJA induced 9h0.499
SRR8749030Uninduced1.515
SRR8749031Uninduced0.444
SRR8749032Uninduced1.217

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.175
SRR8400027Control-Root0.071

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved