Gene detail information of Glyur000117s00007644.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58950.11.00E-165Protein kinase superfamily protein
NRKEH31057.10tyrosine kinase family protein [Medicago truncatula]
COGYP_001958461.12.00E-35hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH7.00E-112Serine/threonine-protein kinase HT1
trEMBLtr|A0A072UMY7|A0A072UMY7_MEDTR0Tyrosine kinase family protein {ECO:0000313|EMBL:KEH31057.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00117149091153816-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000117s00007644.1PF07714.12Pkinase_Tyr1894382.00E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.393
SRR1783600control12.513
SRR1783602moderate drought stress15.811
SRR1811619moderate drought stress15.609

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.943
DRR006520Root Summer glycyrrhizin high producing strain11.853
DRR006521Root Winter glycyrrhizin high producing strain29.534
DRR006522Root Winter glycyrrhizin high producing strain29.417
DRR006523Root Summer glycyrrhizin low producing strain11.967
DRR006524Root Summer glycyrrhizin low producing strain12.337
DRR006525Leaf Summer glycyrrhizin high producing strain11.555
DRR006526Leaf Summer glycyrrhizin high producing strain11.603

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.322
SRR2868004Drought Stress(Tissue:root)25.813
SRR2967015Control (Tissue:root)25.630

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.530
SRR9715740Leave36.744
SRR9715741Leave38.375
SRR9715739Root22.810
SRR9715742Root21.880
SRR9715743Root22.177

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.688
SRR8749028MeJA induced 9h35.940
SRR8749029MeJA induced 9h51.969
SRR8749030Uninduced24.528
SRR8749031Uninduced66.620
SRR8749032Uninduced63.064

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.536
SRR8400027Control-Root16.729

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved