Gene detail information of Glyur000118s00009671.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G47840.14.00E-160hexokinase 3
NRXP_003550424.10PREDICTED: hexokinase-2, chloroplastic-like isoform X1 [Glycine max]
COGYP_001679802.12.00E-63hexokinase [Heliobacterium modesticaldum Ice1]
Swissprottr|Q6Q8A5|HXK2_TOBAC0Hexokinase-2, chloroplastic (Precursor)
trEMBLtr|I1MY29|I1MY29_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G37720.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00118250674254707-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00844HK EC:2.7.1.1 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Streptomycin biosynthesismap00521
Neomycin, kanamycin and gentamicin biosynthesismap00524
HIF-1 signaling pathwaymap04066
Insulin signaling pathwaymap04910
Carbohydrate digestion and absorptionmap04973
Central carbon metabolism in cancermap05230
Type II diabetes mellitusmap04930


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0004396  hexokinase activity

GO:0005524  ATP binding

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000118s00009671.1PF00349.16Hexokinase_1482332.70E-52
Glyur000118s00009671.1PF03727.11Hexokinase_22434831.40E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.790
SRR1783600control6.756
SRR1783602moderate drought stress4.828
SRR1811619moderate drought stress4.787

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.304
DRR006520Root Summer glycyrrhizin high producing strain12.189
DRR006521Root Winter glycyrrhizin high producing strain6.991
DRR006522Root Winter glycyrrhizin high producing strain7.024
DRR006523Root Summer glycyrrhizin low producing strain11.589
DRR006524Root Summer glycyrrhizin low producing strain11.084
DRR006525Leaf Summer glycyrrhizin high producing strain10.253
DRR006526Leaf Summer glycyrrhizin high producing strain10.172

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.030
SRR2868004Drought Stress(Tissue:root)25.864
SRR2967015Control (Tissue:root)25.833

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.139
SRR9715740Leave13.920
SRR9715741Leave16.924
SRR9715739Root8.039
SRR9715742Root14.012
SRR9715743Root12.955

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.987
SRR8749028MeJA induced 9h13.225
SRR8749029MeJA induced 9h14.145
SRR8749030Uninduced13.301
SRR8749031Uninduced8.044
SRR8749032Uninduced9.796

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.137
SRR8400027Control-Root31.737

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved