Gene detail information of Glyur000119s00012159.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61430.1 | 2.00E-16 | NAC domain containing protein 100 |
| NR | XP_003551739.1 | 3.14E-49 | PREDICTED: NAC domain-containing protein 100-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9FLJ2|NC100_ARATH | 2.00E-18 | NAC domain-containing protein 100 |
| trEMBL | tr|K7MUU0|K7MUU0_SOYBN | 1.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G49620.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00119 | 131748 | 133003 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000119s00012159.1 | PF02365.10 | NAM | 19 | 66 | 6.20E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.060 |
| SRR1783600 | control | 5.247 |
| SRR1783602 | moderate drought stress | 2.523 |
| SRR1811619 | moderate drought stress | 2.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.433 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.605 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.312 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.712 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.176 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.044 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.018 |
| SRR2967015 | Control (Tissue:root) | 2.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.582 |
| SRR9715740 | Leave | 0.317 |
| SRR9715741 | Leave | 1.032 |
| SRR9715739 | Root | 6.279 |
| SRR9715742 | Root | 7.883 |
| SRR9715743 | Root | 8.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.789 |
| SRR8749028 | MeJA induced 9h | 24.807 |
| SRR8749029 | MeJA induced 9h | 21.523 |
| SRR8749030 | Uninduced | 43.602 |
| SRR8749031 | Uninduced | 41.800 |
| SRR8749032 | Uninduced | 38.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.065 |
| SRR8400027 | Control-Root | 7.461 |