Gene detail information of Glyur000119s00012185.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01090.20SNF1 kinase homolog 10
NRXP_004491852.10PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1 [Cicer arietinum]
COGNP_389459.12.00E-33serine/threonine protein kinase [Bacillus subtilis subsp. subtilis str. 168]
Swissprottr|Q38997|KIN10_ARATH0SNF1-related protein kinase catalytic subunit alpha KIN10
trEMBLtr|I1N4G7|I1N4G7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G49770.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00119258856267941-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07198PRKAA, AMPK EC:2.7.11.11 FoxO signaling pathway map04068
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Tight junctionmap04530
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - multiple speciesmap04213
Circadian rhythmmap04710
Fluid shear stress and atherosclerosismap05418
Hypertrophic cardiomyopathy (HCM)map05410
Non-alcoholic fatty liver disease (NAFLD)map04932
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0003676  nucleic acid binding

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000119s00012185.1PF00069.20Pkinase2114634.40E-80
Glyur000119s00012185.1PF00627.26UBA4855213.30E-06
Glyur000119s00012185.1PF02149.14KA16617056.70E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control42.887
SRR1783600control42.953
SRR1783602moderate drought stress42.262
SRR1811619moderate drought stress42.211

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.654
DRR006520Root Summer glycyrrhizin high producing strain57.220
DRR006521Root Winter glycyrrhizin high producing strain50.669
DRR006522Root Winter glycyrrhizin high producing strain49.341
DRR006523Root Summer glycyrrhizin low producing strain63.623
DRR006524Root Summer glycyrrhizin low producing strain63.807
DRR006525Leaf Summer glycyrrhizin high producing strain29.044
DRR006526Leaf Summer glycyrrhizin high producing strain28.700

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)62.575
SRR2868004Drought Stress(Tissue:root)68.980
SRR2967015Control (Tissue:root)69.515

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.483
SRR9715740Leave38.754
SRR9715741Leave45.530
SRR9715739Root29.024
SRR9715742Root43.835
SRR9715743Root44.611

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.016
SRR8749028MeJA induced 9h27.603
SRR8749029MeJA induced 9h20.638
SRR8749030Uninduced20.568
SRR8749031Uninduced33.011
SRR8749032Uninduced20.462

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.015
SRR8400027Control-Root57.026

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved