Gene detail information of Glyur000119s00012190.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18670.10Protein kinase superfamily protein
NRXP_004491856.10PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X1 [Cicer arietinum]
COGYP_007468874.17.00E-23serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9ZVM9|Y1461_ARATH2.00E-169Probable serine/threonine-protein kinase At1g54610
trEMBLtr|G7L344|G7L344_MEDTR0Cyclin-dependent kinase C {ECO:0000313|EMBL:AES77534.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00119288892293853-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000119s00012190.1PF00069.20Pkinase1284123.70E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.773
SRR1783600control3.773
SRR1783602moderate drought stress2.956
SRR1811619moderate drought stress3.011

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.415
DRR006520Root Summer glycyrrhizin high producing strain2.476
DRR006521Root Winter glycyrrhizin high producing strain1.729
DRR006522Root Winter glycyrrhizin high producing strain1.636
DRR006523Root Summer glycyrrhizin low producing strain1.626
DRR006524Root Summer glycyrrhizin low producing strain1.622
DRR006525Leaf Summer glycyrrhizin high producing strain1.556
DRR006526Leaf Summer glycyrrhizin high producing strain1.553

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.859
SRR2868004Drought Stress(Tissue:root)3.297
SRR2967015Control (Tissue:root)3.536

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.992
SRR9715740Leave1.472
SRR9715741Leave1.164
SRR9715739Root0.126
SRR9715742Root0.761
SRR9715743Root0.434

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.457
SRR8749028MeJA induced 9h2.319
SRR8749029MeJA induced 9h4.831
SRR8749030Uninduced1.167
SRR8749031Uninduced0.661
SRR8749032Uninduced0.923

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.351
SRR8400027Control-Root8.471

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved