Gene detail information of Glyur000121s00009693.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61610.19.00E-146Galactose mutarotase-like superfamily protein
NRXP_004494784.10PREDICTED: putative glucose-6-phosphate 1-epimerase-like isoform X1 [Cicer arietinum]
COGYP_002355684.12.00E-63aldose 1-epimerase [Thauera sp. MZ1T]
Swissprottr|Q40784|AAPC_CENCI5.00E-149Putative glucose-6-phosphate 1-epimerase
trEMBLtr|V7BMQ4|V7BMQ4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW19264.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001215639760939+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000121s00009693.2PF01263.15Aldose_epim242982.80E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.132
SRR1783600control22.143
SRR1783602moderate drought stress25.372
SRR1811619moderate drought stress24.890

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.456
DRR006520Root Summer glycyrrhizin high producing strain30.861
DRR006521Root Winter glycyrrhizin high producing strain34.199
DRR006522Root Winter glycyrrhizin high producing strain33.857
DRR006523Root Summer glycyrrhizin low producing strain32.146
DRR006524Root Summer glycyrrhizin low producing strain32.058
DRR006525Leaf Summer glycyrrhizin high producing strain17.345
DRR006526Leaf Summer glycyrrhizin high producing strain16.660

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.008
SRR2868004Drought Stress(Tissue:root)13.527
SRR2967015Control (Tissue:root)15.934

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.424
SRR9715740Leave10.000
SRR9715741Leave6.097
SRR9715739Root10.826
SRR9715742Root22.246
SRR9715743Root19.234

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.566
SRR8749028MeJA induced 9h8.006
SRR8749029MeJA induced 9h9.359
SRR8749030Uninduced5.148
SRR8749031Uninduced3.748
SRR8749032Uninduced4.071

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.437
SRR8400027Control-Root48.024

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved