Gene detail information of Glyur000121s00009722.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61740.20SET domain protein 14
NRXP_004494815.10PREDICTED: histone-lysine N-methyltransferase ATX3-like [Cicer arietinum]
COGYP_003280830.18.00E-26nuclear protein SET [Comamonas testosteroni CNB-2]
Swissprottr|Q9M364|ATX3_ARATH0Histone-lysine N-methyltransferase ATX3
trEMBLtr|A0A072U651|A0A072U651_MEDTR0Histone-lysine N-methyltransferase ATX3 {ECO:0000313|EMBL:KEH24628.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00121229960237717-


Gene family

Gene familysubfamily
Transcription Factors FamilyPHD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000121s00009722.1PF00855.12PWWP2002963.30E-16
Glyur000121s00009722.1PF00628.24PHD3734257.20E-07
Glyur000121s00009722.1PF13832.1zf-HC5HC2H_25997159.70E-23
Glyur000121s00009722.1PF00856.23SET8489532.10E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.154
SRR1783600control1.140
SRR1783602moderate drought stress1.280
SRR1811619moderate drought stress1.283

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.698
DRR006520Root Summer glycyrrhizin high producing strain1.648
DRR006521Root Winter glycyrrhizin high producing strain1.140
DRR006522Root Winter glycyrrhizin high producing strain1.191
DRR006523Root Summer glycyrrhizin low producing strain0.627
DRR006524Root Summer glycyrrhizin low producing strain0.610
DRR006525Leaf Summer glycyrrhizin high producing strain2.526
DRR006526Leaf Summer glycyrrhizin high producing strain2.406

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.948
SRR2868004Drought Stress(Tissue:root)4.162
SRR2967015Control (Tissue:root)4.582

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.472
SRR9715740Leave2.699
SRR9715741Leave1.917
SRR9715739Root0.230
SRR9715742Root0.519
SRR9715743Root0.813

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.032
SRR8749028MeJA induced 9h1.872
SRR8749029MeJA induced 9h1.226
SRR8749030Uninduced0.541
SRR8749031Uninduced0.373
SRR8749032Uninduced0.235

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.981
SRR8400027Control-Root3.541

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved