Gene detail information of Glyur000121s00009731.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00990.12.00E-166Transcription factor jumonji (jmjC) domain-containing protein
NRXP_004494828.10PREDICTED: uncharacterized protein LOC101512170 isoform X1 [Cicer arietinum]
Swissprottr|Q9SSE9|JMJ25_ARATH3.00E-112Lysine-specific demethylase JMJ25
trEMBLtr|A0A072U4H4|A0A072U4H4_MEDTR0Transcription factor jumonji (JmjC) domain protein {ECO:0000313|EMBL:KEH24644.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00121272786279665-


Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000121s00009731.1PF02373.17JmjC8069044.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.242
SRR1783600control9.261
SRR1783602moderate drought stress10.080
SRR1811619moderate drought stress9.964

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.848
DRR006520Root Summer glycyrrhizin high producing strain10.320
DRR006521Root Winter glycyrrhizin high producing strain9.108
DRR006522Root Winter glycyrrhizin high producing strain8.762
DRR006523Root Summer glycyrrhizin low producing strain12.712
DRR006524Root Summer glycyrrhizin low producing strain13.150
DRR006525Leaf Summer glycyrrhizin high producing strain6.614
DRR006526Leaf Summer glycyrrhizin high producing strain6.367

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.967
SRR2868004Drought Stress(Tissue:root)26.492
SRR2967015Control (Tissue:root)33.992

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.220
SRR9715740Leave7.775
SRR9715741Leave13.582
SRR9715739Root1.107
SRR9715742Root9.778
SRR9715743Root8.209

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.572
SRR8749028MeJA induced 9h16.937
SRR8749029MeJA induced 9h7.549
SRR8749030Uninduced11.728
SRR8749031Uninduced15.041
SRR8749032Uninduced9.329

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.262
SRR8400027Control-Root15.004

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved