Gene detail information of Glyur000121s00009735.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01250.1 | 3.00E-41 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004494833.1 | 5.64E-87 | PREDICTED: ethylene-responsive transcription factor ERF023-like [Cicer arietinum] |
| Swissprot | tr|Q1ECI2|ERF23_ARATH | 6.00E-54 | Ethylene-responsive transcription factor ERF023 |
| trEMBL | tr|I1JS07|I1JS07_SOYBN | 2.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G41910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 304772 | 305308 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009735.1 | PF00847.15 | AP2 | 26 | 76 | 7.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.536 |
| SRR1783600 | control | 0.674 |
| SRR1783602 | moderate drought stress | 1.346 |
| SRR1811619 | moderate drought stress | 1.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.382 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.401 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.411 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.243 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.552 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.597 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.932 |
| SRR2967015 | Control (Tissue:root) | 6.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.267 |
| SRR9715740 | Leave | 4.559 |
| SRR9715741 | Leave | 4.461 |
| SRR9715739 | Root | 11.890 |
| SRR9715742 | Root | 6.561 |
| SRR9715743 | Root | 4.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.790 |
| SRR8749028 | MeJA induced 9h | 1.937 |
| SRR8749029 | MeJA induced 9h | 1.801 |
| SRR8749030 | Uninduced | 1.231 |
| SRR8749031 | Uninduced | 0.143 |
| SRR8749032 | Uninduced | 2.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.998 |
| SRR8400027 | Control-Root | 4.050 |