Gene detail information of Glyur000122s00010165.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48380.1 | 7.00E-82 | BAK1-interacting receptor-like kinase 1 |
| NR | XP_007148302.1 | 0 | hypothetical protein PHAVU_006G197000g [Phaseolus vulgaris] |
| COG | YP_001192956.1 | 1.00E-12 | two component regulator [Flavobacterium johnsoniae UW101] |
| Swissprot | tr|Q9ASS4|Y5838_ARATH | 6.00E-94 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor) |
| trEMBL | tr|K7M1T7|K7M1T7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G32525.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 4384 | 6390 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.12.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000122s00010165.1 | PF00560.28 | LRR_1 | 1 | 17 | 0.5 |
| Glyur000122s00010165.1 | PF00560.28 | LRR_1 | 25 | 44 | 0.26 |
| Glyur000122s00010165.1 | PF07714.12 | Pkinase_Tyr | 198 | 398 | 4.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.504 |
| SRR1783600 | control | 0.429 |
| SRR1783602 | moderate drought stress | 0.171 |
| SRR1811619 | moderate drought stress | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.071 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.728 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.720 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.473 |
| SRR2967015 | Control (Tissue:root) | 1.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.485 |
| SRR9715740 | Leave | 0.482 |
| SRR9715741 | Leave | 2.128 |
| SRR9715739 | Root | 0.248 |
| SRR9715742 | Root | 0.875 |
| SRR9715743 | Root | 0.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.085 |
| SRR8749028 | MeJA induced 9h | 0.896 |
| SRR8749029 | MeJA induced 9h | 0.142 |
| SRR8749030 | Uninduced | 2.942 |
| SRR8749031 | Uninduced | 0.510 |
| SRR8749032 | Uninduced | 0.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.426 |
| SRR8400027 | Control-Root | 0.615 |