Gene detail information of Glyur000122s00010184.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G61680.15.00E-98terpene synthase 14
NRKEH34358.10(3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula]
Swissprottr|P0CV94|NES1_FRAAN1.00E-176(3S,6E)-nerolidol synthase 1
trEMBLtr|A0A072UZ48|A0A072UZ48_MEDTR0(3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase {ECO:0000313|EMBL:KEH34358.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001227276778547+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15086TPS14 EC:4.2.3.25 Monoterpenoid biosynthesis map00902


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0000287  magnesium ion binding

GO:0010333  terpene synthase activity

GO:0016829  lyase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000122s00010184.1PF01397.16Terpene_synth171582.70E-33
Glyur000122s00010184.1PF03936.11Terpene_synth_C1994672.00E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.532
SRR1783600control2.564
SRR1783602moderate drought stress3.003
SRR1811619moderate drought stress2.980

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.007
DRR006520Root Summer glycyrrhizin high producing strain5.026
DRR006521Root Winter glycyrrhizin high producing strain3.099
DRR006522Root Winter glycyrrhizin high producing strain2.984
DRR006523Root Summer glycyrrhizin low producing strain7.148
DRR006524Root Summer glycyrrhizin low producing strain7.166
DRR006525Leaf Summer glycyrrhizin high producing strain6.390
DRR006526Leaf Summer glycyrrhizin high producing strain6.518

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.726
SRR2868004Drought Stress(Tissue:root)6.367
SRR2967015Control (Tissue:root)6.163

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave78.301
SRR9715740Leave20.877
SRR9715741Leave85.463
SRR9715739Root9.723
SRR9715742Root7.778
SRR9715743Root8.407

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.084
SRR8749028MeJA induced 9h12.595
SRR8749029MeJA induced 9h14.346
SRR8749030Uninduced6.123
SRR8749031Uninduced7.278
SRR8749032Uninduced8.898

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.630
SRR8400027Control-Root4.536

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved