Gene detail information of Glyur000122s00010195.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT5G54500.1 | 1.00E-100 | flavodoxin-like quinone reductase 1 |
NR | NP_001266148.1 | 2.48E-133 | flavoprotein WrbA-like [Cicer arietinum] |
COG | YP_004604052.1 | 1.00E-63 | flavoprotein WrbA [Flexistipes sinusarabici DSM 4947] |
Swissprot | tr|Q9LSQ5|FQR1_ARATH | 1.00E-127 | NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305} |
trEMBL | tr|Q8L5Q7|Q8L5Q7_CICAR | 9.00E-134 | Putative quinone oxidoreductase {ECO:0000313|EMBL:CAD31838.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00122 | 109161 | 113022 | - |
Gene family
Gene family | subfamily |
---|---|
Carbohydrate-Active enzymes Family | AA6 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K03809 | wrbA | EC:1.6.5.2 | Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000122s00010195.1 | PF03358.10 | FMN_red | 17 | 144 | 7.10E-11 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 99.719 |
SRR1783600 | control | 99.390 |
SRR1783602 | moderate drought stress | 76.629 |
SRR1811619 | moderate drought stress | 76.445 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 43.648 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 43.720 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 20.770 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 20.099 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 26.535 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 26.947 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.779 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.568 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 860.496 |
SRR2868004 | Drought Stress(Tissue:root) | 1183.958 |
SRR2967015 | Control (Tissue:root) | 954.268 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 41.216 |
SRR9715740 | Leave | 24.341 |
SRR9715741 | Leave | 35.327 |
SRR9715739 | Root | 165.222 |
SRR9715742 | Root | 147.647 |
SRR9715743 | Root | 153.334 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 119.402 |
SRR8749028 | MeJA induced 9h | 172.338 |
SRR8749029 | MeJA induced 9h | 205.450 |
SRR8749030 | Uninduced | 250.703 |
SRR8749031 | Uninduced | 147.860 |
SRR8749032 | Uninduced | 181.474 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 489.973 |
SRR8400027 | Control-Root | 468.603 |