Gene detail information of Glyur000122s00010197.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G27290.10S-locus lectin protein kinase family protein
NRAES63660.20S-locus lectin kinase family protein [Medicago truncatula]
COGYP_004269132.14.00E-22serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprottr|O81832|Y4729_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (Precursor)
trEMBLtr|K7M1S0|K7M1S0_SOYBN0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00122130487134186-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000122s00010197.1PF01453.19B_lectin741651.10E-18
Glyur000122s00010197.1PF00954.15S_locus_glycop1912985.20E-28
Glyur000122s00010197.1PF08276.6PAN_23233751.70E-10
Glyur000122s00010197.1PF00069.20Pkinase4356751.90E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.024
SRR1783600control15.117
SRR1783602moderate drought stress9.084
SRR1811619moderate drought stress9.111

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.888
DRR006520Root Summer glycyrrhizin high producing strain6.957
DRR006521Root Winter glycyrrhizin high producing strain1.080
DRR006522Root Winter glycyrrhizin high producing strain1.118
DRR006523Root Summer glycyrrhizin low producing strain8.037
DRR006524Root Summer glycyrrhizin low producing strain7.856
DRR006525Leaf Summer glycyrrhizin high producing strain1.169
DRR006526Leaf Summer glycyrrhizin high producing strain1.330

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.736
SRR2868004Drought Stress(Tissue:root)8.869
SRR2967015Control (Tissue:root)10.586

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.892
SRR9715740Leave0.746
SRR9715741Leave2.093
SRR9715739Root8.914
SRR9715742Root19.196
SRR9715743Root17.536

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.499
SRR8749028MeJA induced 9h7.132
SRR8749029MeJA induced 9h5.890
SRR8749030Uninduced2.948
SRR8749031Uninduced1.496
SRR8749032Uninduced2.132

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.048
SRR8400027Control-Root16.316

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved