Gene detail information of Glyur000122s00010198.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21380.12.00E-114receptor kinase 3
NRXP_003593411.10S-receptor kinase-like protein [Medicago truncatula]
COGYP_004179485.12.00E-06serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprottr|D6NTT4|SD18_ARATH7.00E-131Receptor-like serine/threonine-protein kinase SD1-8 (Precursor)
trEMBLtr|G7IK52|G7IK52_MEDTR0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00122138531156350+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000122s00010198.1PF01453.19B_lectin761899.30E-33
Glyur000122s00010198.1PF00954.15S_locus_glycop2153241.70E-29
Glyur000122s00010198.1PF01453.19B_lectin5236363.70E-31
Glyur000122s00010198.1PF00954.15S_locus_glycop6627716.10E-28
Glyur000122s00010198.1PF08276.6PAN_27928573.10E-20
Glyur000122s00010198.1PF01453.19B_lectin98610948.50E-33
Glyur000122s00010198.1PF00954.15S_locus_glycop112012292.10E-20
Glyur000122s00010198.1PF08276.6PAN_2125113172.20E-18
Glyur000122s00010198.1PF00069.20Pkinase134314183.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.048
SRR1783600control1.039
SRR1783602moderate drought stress1.112
SRR1811619moderate drought stress1.049

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.002
DRR006520Root Summer glycyrrhizin high producing strain1.055
DRR006521Root Winter glycyrrhizin high producing strain1.151
DRR006522Root Winter glycyrrhizin high producing strain0.954
DRR006523Root Summer glycyrrhizin low producing strain1.797
DRR006524Root Summer glycyrrhizin low producing strain1.874
DRR006525Leaf Summer glycyrrhizin high producing strain0.285
DRR006526Leaf Summer glycyrrhizin high producing strain0.348

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.003
SRR2868004Drought Stress(Tissue:root)5.645
SRR2967015Control (Tissue:root)5.726

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.595
SRR9715740Leave1.084
SRR9715741Leave3.233
SRR9715739Root0.243
SRR9715742Root1.919
SRR9715743Root1.596

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.984
SRR8749028MeJA induced 9h12.501
SRR8749029MeJA induced 9h3.956
SRR8749030Uninduced8.444
SRR8749031Uninduced9.992
SRR8749032Uninduced5.973

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.652
SRR8400027Control-Root2.174

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved