Gene detail information of Glyur000122s00010199.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21380.10receptor kinase 3
NRXP_004485681.10PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum]
COGYP_005517714.18.00E-25serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|D6NTT4|SD18_ARATH0Receptor-like serine/threonine-protein kinase SD1-8 (Precursor)
trEMBLtr|I1ME77|I1ME77_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07080.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00122157837163911-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000122s00010199.1PF01453.19B_lectin861951.80E-29
Glyur000122s00010199.1PF00954.15S_locus_glycop2293392.70E-36
Glyur000122s00010199.1PF08276.6PAN_23604257.20E-21
Glyur000122s00010199.1PF12398.3DUF36605015332.10E-10
Glyur000122s00010199.1PF07714.12Pkinase_Tyr5467435.20E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.504
SRR1783600control7.422
SRR1783602moderate drought stress10.371
SRR1811619moderate drought stress10.290

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.304
DRR006520Root Summer glycyrrhizin high producing strain11.417
DRR006521Root Winter glycyrrhizin high producing strain17.107
DRR006522Root Winter glycyrrhizin high producing strain16.812
DRR006523Root Summer glycyrrhizin low producing strain14.615
DRR006524Root Summer glycyrrhizin low producing strain14.475
DRR006525Leaf Summer glycyrrhizin high producing strain0.440
DRR006526Leaf Summer glycyrrhizin high producing strain0.479

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.331
SRR2868004Drought Stress(Tissue:root)8.501
SRR2967015Control (Tissue:root)6.629

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.101
SRR9715740Leave2.135
SRR9715741Leave8.031
SRR9715739Root1.205
SRR9715742Root10.808
SRR9715743Root8.816

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.037
SRR8749028MeJA induced 9h25.621
SRR8749029MeJA induced 9h12.066
SRR8749030Uninduced32.684
SRR8749031Uninduced24.409
SRR8749032Uninduced10.027

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.508
SRR8400027Control-Root11.579

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved