Gene detail information of Glyur000122s00010207.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G27310.11.00E-22B-box type zinc finger family protein
NRXP_003545808.12.44E-58PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Glycine max]
Swissprottr|Q9LJB7|BBX32_ARATH1.00E-10B-box zinc finger protein 32 {ECO:0000303|PubMed:19920209}
trEMBLtr|I1ME84|I1ME84_SOYBN9.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07140.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00122205652206083+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000122s00010207.1PF00643.19zf-B_box2404.10E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.247
SRR1783600control35.883
SRR1783602moderate drought stress8.984
SRR1811619moderate drought stress9.398

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.237
DRR006520Root Summer glycyrrhizin high producing strain13.113
DRR006521Root Winter glycyrrhizin high producing strain70.430
DRR006522Root Winter glycyrrhizin high producing strain72.079
DRR006523Root Summer glycyrrhizin low producing strain8.173
DRR006524Root Summer glycyrrhizin low producing strain9.463
DRR006525Leaf Summer glycyrrhizin high producing strain7.743
DRR006526Leaf Summer glycyrrhizin high producing strain7.397

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.455
SRR2868004Drought Stress(Tissue:root)3.420
SRR2967015Control (Tissue:root)1.110

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.142
SRR9715740Leave15.133
SRR9715741Leave24.922
SRR9715739Root19.828
SRR9715742Root12.875
SRR9715743Root13.413

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.970
SRR8749028MeJA induced 9h20.200
SRR8749029MeJA induced 9h18.107
SRR8749030Uninduced0.966
SRR8749031Uninduced4.477
SRR8749032Uninduced19.246

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.968
SRR8400027Control-Root40.849

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved