Gene detail information of Glyur000123s00008418.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28930.31.00E-128protein kinase 1B
NRXP_004505862.10PREDICTED: protein kinase APK1B, chloroplastic-like isoform X3 [Cicer arietinum]
COGYP_001958461.11.00E-16hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q06548|APK1A_ARATH2.00E-164Protein kinase APK1A, chloroplastic (Precursor)
trEMBLtr|I1LK24|I1LK24_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G14820.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001238765691255-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000123s00008418.1PF00069.20Pkinase903446.00E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.250
SRR1783600control29.901
SRR1783602moderate drought stress28.821
SRR1811619moderate drought stress28.353

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.757
DRR006520Root Summer glycyrrhizin high producing strain10.998
DRR006521Root Winter glycyrrhizin high producing strain12.858
DRR006522Root Winter glycyrrhizin high producing strain11.874
DRR006523Root Summer glycyrrhizin low producing strain20.648
DRR006524Root Summer glycyrrhizin low producing strain20.134
DRR006525Leaf Summer glycyrrhizin high producing strain54.161
DRR006526Leaf Summer glycyrrhizin high producing strain53.283

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.470
SRR2868004Drought Stress(Tissue:root)16.020
SRR2967015Control (Tissue:root)32.087

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.234
SRR9715740Leave91.888
SRR9715741Leave130.043
SRR9715739Root17.983
SRR9715742Root38.195
SRR9715743Root31.162

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.547
SRR8749028MeJA induced 9h0.552
SRR8749029MeJA induced 9h0.251
SRR8749030Uninduced0.386
SRR8749031Uninduced0.081
SRR8749032Uninduced0.042

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.803
SRR8400027Control-Root16.167

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved