Gene detail information of Glyur000123s00008423.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45910.12.00E-139U-box domain-containing protein kinase family protein
NRXP_006590986.10PREDICTED: U-box domain-containing protein 33-like [Glycine max]
COGYP_007834776.11.00E-20Serine/threonine protein kinase [Megamonas hypermegale ART12/1]
Swissprottr|Q8GUH1|PUB33_ARATH8.00E-164Serine/threonine-protein kinase
trEMBLtr|K7LPP0|K7LPP0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G14860.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00123115007119915-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.14.2
Ubiquitin FamilyU_box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0016567  protein ubiquitination


molecular_function

GO:0004672  protein kinase activity

GO:0004842  ubiquitin-protein transferase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000123s00008423.2PF07714.12Pkinase_Tyr3015514.70E-34
Glyur000123s00008423.2PF04564.10U-box5676362.60E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.234
SRR1783600control6.214
SRR1783602moderate drought stress5.306
SRR1811619moderate drought stress5.227

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.744
DRR006520Root Summer glycyrrhizin high producing strain6.688
DRR006521Root Winter glycyrrhizin high producing strain15.075
DRR006522Root Winter glycyrrhizin high producing strain14.725
DRR006523Root Summer glycyrrhizin low producing strain5.839
DRR006524Root Summer glycyrrhizin low producing strain5.796
DRR006525Leaf Summer glycyrrhizin high producing strain10.057
DRR006526Leaf Summer glycyrrhizin high producing strain9.872

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.464
SRR2868004Drought Stress(Tissue:root)7.748
SRR2967015Control (Tissue:root)8.065

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.916
SRR9715740Leave20.368
SRR9715741Leave15.888
SRR9715739Root1.068
SRR9715742Root6.985
SRR9715743Root6.174

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.765
SRR8749028MeJA induced 9h8.562
SRR8749029MeJA induced 9h4.823
SRR8749030Uninduced4.810
SRR8749031Uninduced1.887
SRR8749032Uninduced1.340

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.087
SRR8400027Control-Root12.365

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved